Sinorhizobium meliloti BL225C: SinmeB_6098
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Entry
SinmeB_6098 CDS
T01884
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
smq
Sinorhizobium meliloti BL225C
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smq02000
]
SinmeB_6098
Transporters [BR:
smq02000
]
Other transporters
Pores ion channels [TC:
1
]
SinmeB_6098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
UL78
Motif
Other DBs
NCBI-ProteinID:
AEG07236
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Position
pSINMEB01:complement(1014551..1016650)
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AA seq
699 aa
AA seq
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MSAVFKHGDRGLAAIVLCLQLVFGLAATVAAQEPATATAPPAKVQQLIELLDDPEVRQWL
TAKQAAAPAAATTPAGLASQWIAEIRRHLGGIRNAVPRVVPEWMAARERIAAEMHQGTMP
ILRGFAFLLLAGYGAEFLLRYLLRRSASRSLAQFGPGLDALLRIAPLVVFAIAAIAAFVL
AGWPRRLEVAVAPLLIAWIAARLLVAIAAAVFKPAEDGRALEGGVSLTPGAAHFWHRRFV
LFACSVAFLWAVIDVMQALAFPADVRDLTAAALGLVVLGLAIDTVLRRPVAEMSAGRRIM
RNALLIGFLVLLWLVWVAGMKVLFWLGIYVLGLPPLLRFTSATTRTMLDAEAADNVRVMR
NVLIDRGARFAIIGLAAAWLAVVFRINGSAMMQDDVFNRIFRGLLAGVVILLAADLIWQL
AKGFIDLHLRRASVNGAADSAQLARSMRLRTLLPILRNFLAVFIAVVAGMMVLSGLGVHV
GPLIAGAGVFGVAIGFGSQTLVKDILSGVFYMMDDAFRVGEYIQSGSYKGTVESFSIRSV
KLRHHRGPVFTVPFGSLGAVQNMSRDWVIDKFMINVSYDADVAKVKKVVKGIGAALLDDP
ELGPLIIETVKMKGVEQFGDYGITLSFAMTTKPGHQTQIRRRAQAMIKDAFAAHSIHFAS
PTVQVAGDEAQATAAAAATRDAIAKRNAAAAQTGETAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtcttcaagcatggtgatagaggccttgccgcgatcgttctgtgtctccag
ctcgttttcgggcttgccgctacggtggcagcacaggagccggcgaccgctaccgcgccg
cccgcgaaggtccagcaactgatcgaattgctggacgacccggaagtccggcaatggctg
accgccaagcaggccgcggcgccggccgccgccacgacaccggcgggtctcgcatcccaa
tggatcgcagaaatcaggaggcaccttggcggcatcaggaacgccgtgccgcgggtggtt
cccgagtggatggcggcgagagagcgcatcgcggccgagatgcaccaagggacgatgccg
atcctgcgcggcttcgcctttttgctccttgccggctacggcgccgagttcctcctgcgt
tatctcctgcggcgcagtgcaagccgaagcttggctcagttcgggcctggtcttgacgct
cttcttcgcatcgcaccgctggtcgtctttgcgatcgcagcgatcgcggccttcgtgtta
gccggctggccacgccggctcgaggtggcggtcgcaccgctgctcatcgcctggatcgcc
gcccgcttgctggttgcaatcgctgcggccgtgttcaagcccgcagaggacggcagggcg
ctggaggggggcgtatctctcacgccgggagcagcgcatttctggcacagacgattcgtg
ctgtttgcctgttccgttgctttcctgtgggccgtcatcgacgtgatgcaggcactcgcg
tttccggccgacgtccgcgatcttacggctgccgccctcggcctcgtcgtacttggcctg
gcgatcgataccgtgttgcgccgacctgtcgcggaaatgtcagccggacggcggataatg
cgcaatgcgctgctcatcggcttccttgtgctgctgtggctcgtctgggtcgcgggcatg
aaggtgctgttctggctcggcatctatgtactcggcctgccgccgctgttgcgtttcacc
agcgccactacaaggacaatgctggacgccgaagcggcggataacgtccgggtcatgcgc
aacgtcctgattgaccgcggtgcccggttcgcgatcatagggctcgcggccgcctggctc
gccgtcgttttccgtatcaacggcagtgcgatgatgcaggacgatgttttcaaccggatc
ttccgcggtcttcttgcaggcgtagttattctgcttgcggcagatctgatctggcaactg
gcgaagggtttcatcgatctgcacctgaggcgggcgagcgtcaacggtgctgccgactca
gcgcagctcgcccgcagcatgcggttgcgcacgctgctgccgatcctgcgcaattttctt
gcggtgtttattgcggtcgtcgccggcatgatggtgctctccggcctcggcgttcatgtc
ggcccgctgatcgccggtgccggcgtctttggtgtcgccatcggcttcggctcacagacc
ctggtcaaggatatcctcagtggcgtgttttacatgatggacgatgcctttcgggtcggc
gaatacatccaaagcggcagctacaaaggcacagtggaatccttcagcatccgttcggtg
aagcttcggcatcaccgcggaccggtgttcactgttcctttcggctcgctcggcgctgtc
cagaacatgagccgcgactgggttatcgacaagttcatgatcaacgtctcctacgatgcc
gacgttgccaaggtgaagaaggtcgtcaagggcataggcgccgcgctcctcgacgatccc
gaactcgggccgctgatcatagaaacggtgaagatgaagggcgtcgagcagttcggcgac
tatggcatcaccttgagtttcgccatgacgacgaagcccggacaccagacccagatcagg
cgccgggcccaggccatgatcaaggatgccttcgcggcccacagcatccattttgcctcg
ccgaccgttcaggtcgccggtgatgaagcgcaagcgacagcggccgctgccgcgacacgc
gacgcaatcgcgaaaaggaatgcggccgcggcgcagacgggggagacagccgccgagtag
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