Staphylothermus marinus: Smar_0077
Help
Entry
Smar_0077 CDS
T00485
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smr
Staphylothermus marinus
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smr03400
]
Smar_0077
DNA repair and recombination proteins [BR:
smr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Smar_0077
Archaeal homologous recombinant proteins
Smar_0077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
AAA_29
AAA_27
AAA_22
TPR_MLP1_2
Rad50_zn_hook
AAA_25
APG6_N
BRE1
SbcC_Walker_B
TMF_TATA_bd
HsbA
AAA_16
AAA_15
COG6_N
DUF4200
Motif
Other DBs
NCBI-ProteinID:
ABN69190
UniProt:
A3DKN0
LinkDB
All DBs
Position
71572..74070
Genome browser
AA seq
832 aa
AA seq
DB search
MIILGLRLKNIRSYIDKTIVFPRQGITVIYGDVGTGKSTILSSIAYALFGQPKSKIPDPM
ERYAYPKGEDLLRIGTREGYVRLLIQQKNRIILVERRLIKRSEGKVSDPGGRLVVFEYVE
ENGEQKLKLIHDRYYSSEELKRRVLKELGIPEIISKQKPLIFTNAIYVPQFSVNDIINLG
DNERILLINKALNIDKYNNIKTNLSKLTSQILNSEIKNLRNYEQRLESILGKNSIEELEK
KIKEAEKEINNINMAIQQVDESIRKLENEIKNYQQQYEKKQEERNNIKQKLAVIKHSLEE
LRAKEDNIKQLTSLLGLNEPIQLDVLSSKIKSQLEEIDKQLKNIDQRKQELQKKIEENRH
LSETINAEINKYREKIGELKAKINSKNEMLSEKQKELLEKEELLKKGICPLCKQKIAHEH
GYKLINSLKNEIETIKKEILEIQQLLRTALEELKKYEDKNLEINNEIKRLDEQLRIIDKE
RDKLINEKMELNDKLSKLTEIKRLCDEIEKLKQKIRDKDLLEKQLVHIETSISELKKIID
EETRKYKLLMNKKTDLIGKREKVKAEIESYKQQIQQLKEYYEEYQKTKEQRMFLENMKKF
LYGERNRRGLFYDLVEKVEERVRSIAYDKFRSLFINYFLKLMEDHEILDVDLDEKFSPVF
RIKTKRIIGEITQPSGGQLTSVSLAYRLALNAVARSMTPQLRNSTLILDEPTYGFSPERV
EKLRELLYEISNRGKRQIIVVTHDRNLLDVGDCRIKLDINRENNETIVNYEECNNLSKEY
YTYIENILSKGYTSILTTREAEEKEEKLVGGFEPKFKSRKVSKSRSIFDFLA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatcatattggggctcagactgaaaaacattcgtagctacatagataaaacaatagta
tttccgcggcaaggcattacagtaatatatggagatgtgggaacaggtaaatcaacaata
ttatcaagtatagcatacgcattatttggacaaccaaaatctaagatccctgatcctatg
gagagatatgcttatcctaaaggcgaagatctcctaagaatagggacaagagaaggatat
gttaggctattaatacagcaaaagaatagaataatactcgttgaaagaagacttataaag
agatcagagggtaaagtaagtgatccgggcggtagattagtagtattcgaatatgtagaa
gaaaatggtgaacaaaaactaaaactaattcacgacagatattattcctcggaggaatta
aagaggagagttctgaaagaattaggtatacccgagataatttcgaagcagaaaccacta
atattcacaaatgctatatatgttcctcaattcagtgtaaacgacattattaacttggga
gacaatgaaagaatattattaataaataaagcattgaatattgacaaatacaataatata
aagactaacttaagtaagctaacatctcaaatccttaatagtgaaataaaaaacttgaga
aattatgaacaaagacttgaaagcatacttggtaaaaatagtatagaagagctagaaaag
aagatcaaggaggctgaaaaagagataaacaatataaatatggcaattcagcaagtagat
gaatctattcgaaagctggaaaacgagatcaagaactaccagcaacaatacgagaaaaaa
caggaagaacgcaacaatataaagcagaaactagcagttataaagcatagcttagaagaa
ctacgagcaaaagaggataatataaaacagctaacaagtcttctcggactaaatgaacca
atacaactagatgttttatcatcgaaaattaagagccaactagaagaaatagataaacaa
ttaaagaacattgatcaacgaaaacaagaactacaaaagaaaatagaagaaaacagacac
ttatcagaaacaataaacgcagaaataaataagtacagagaaaaaataggagaattaaaa
gcaaaaattaacagtaaaaacgagatgttatctgaaaaacaaaaagaacttcttgaaaaa
gaagagttattgaaaaaaggaatttgtcccctctgtaaacaaaaaatcgcacatgaacat
ggctataagttaattaattcattaaagaacgaaatagagacgattaagaaggagatatta
gagattcaacagttacttagaacggctcttgaggaattgaaaaagtatgaagacaaaaac
ctcgaaattaataatgaaattaaacgcttagatgaacaattaaggatcattgataaagaa
agagataagcttatcaatgaaaagatggaattgaacgataaattatctaagctcacagaa
ataaagcgtctctgtgacgaaatagagaagttgaaacagaaaataagggataaagatcta
ttggagaaacagttagtacatatagagacttctatttcagagttaaagaaaataattgat
gaagaaaccagaaaatataaattattaatgaataagaaaacagatctaattggtaaaagg
gaaaaagtgaaggctgaaatagaatcttataaacaacagattcaacagttaaaagaatat
tatgaggagtaccaaaaaactaaggagcaaagaatgttcctagaaaacatgaagaaattc
ctatatggcgaaagaaataggagaggcttattctatgacttagtggagaaggttgaggaa
agagttaggagcatagcttatgataagttccgttcattatttataaattacttcttaaag
ttgatggaggatcatgagatattagatgttgacctagatgagaaattcagcccagttttc
cgaataaaaactaagagaataattggcgaaattacacaaccaagcggaggtcaattaaca
agtgttagcttagcttatcgtttagcattaaatgctgtagctagaagtatgactccccag
ttaagaaatagtactttaatacttgatgaaccaacttatggattcagtcctgaaagagtt
gagaaacttcgcgaacttctatatgagataagcaatcgtggtaagagacaaataatcgtt
gtaacacatgatcggaacctattagatgttggtgattgcagaataaaacttgatattaac
agggaaaataatgaaacaatagttaattatgaagaatgtaataatttatcgaaagaatac
tatacatatattgaaaacattttatccaaaggatacacatcaatactgaccactagggaa
gcggaggagaaagaggaaaaactagtaggaggatttgagccaaaatttaaaagcaggaag
gtgagtaagtctagaagcattttcgactttctggcttag
DBGET
integrated database retrieval system
