Staphylothermus marinus: Smar_0096
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Entry
Smar_0096 CDS
T00485
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
smr
Staphylothermus marinus
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Smar_0096
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
Cas3-like_C_2
AAA_19
QueF
Motif
Other DBs
NCBI-ProteinID:
ABN69209
UniProt:
A3DKP9
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All DBs
Position
complement(92805..95918)
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AA seq
1037 aa
AA seq
DB search
MRIRTKTILEKLGYNYLYRVDEGSEPEYSNATFSDIVPEFSNHRIGSFKLYKHQYTGYQA
LAQRKNLIIKSGTGSGKTEVWILHAMNMIKKDEKTHVLVLYPTLALANDQIKRIREYLSL
INKEPIQLDSVRRAELEASIGKRGLRDLIGKTNIIISNPAFILHDVKKHLLHPTRSPLYS
FYKRLDMIVVDEIDFYGPRSLALLLALLRILSEYSDVKPQIAVLTATLSNPEDLGKYLKD
ITSREYEVVQGKPFNVDNHQYIILGKNLENIWKILVNNKELVENIGDPTIRKELLNAIDS
FKYFVENIHRIISIAHSQGIDLPSPSIDYGEIINEYFKDDYVTLVFTYSISMAEEVVRTI
KHRYGEDKPIASHHHLVPKKKREEIEEKARKGLIKVIVSPRTLSQGIDIGTIARIVHLGL
PSDVREYYQREGRKGRRKELGFAETVIIPFSRWDKELLSRGFDVFEKWLGLGIEKTLVNP
DNLYIYLFTGLAKLLSPWYREKLNELEEKALKKAGVLTKKGINENLMKWIFERINFYEFA
PPYGIKRYLVKGDKLIPLEPIGHCDLVEKFQPGNIDYSEEAIITHLDTGKTTRYVRAVYE
KPIREINFYSDDAFAVALEEYRYIKMNWGEKPNIMRDILAGRLTSEELCVVYTPWNGFGK
YRKIPDRCIWKLRSEKPRVLVRGDKAIVYYDRRQIYVPKPTAGEYRDYTYGYLYSVDPGE
NSDLLRLGLALLMIVLRRLYGIAFETIMYDVIKLGEYKYFSLHEPEAAGIIDKINWLDVR
RKIEEYKFTDLDTILLSEIDDISYSILISYDFEWEIIRQQMLRIIDYILARDKIKVLFSG
KEIVVPKPSPALKLLALSLMVEVVGEETELPRILVAINAYDGEKHYPAIALYPPIPYIKP
PHEILDVEKKLLEKIMYEDYKIIIPNKEKTLYQLKTANMKQLALIIGNMPDKTIDITQKI
QTINLKNVSFQELAIQYTGQEKTVNPSRIREILKTIREKMTIYETHRKQIIEYLRNMSET
TYLSYLIIQALINEIKQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtataagaacaaaaactatactggaaaagcttggatacaactatttgtaccgagtg
gatgaaggaagcgagccagaatactcaaatgctacgttttcagatattgtcccggagttc
tctaatcatcgaatagggagttttaaactttataaacaccaatatacgggataccaggca
ctggctcagagaaaaaacttgattatcaagtctggaactggtagtggtaagacagaggtt
tggatactgcatgctatgaatatgattaagaaagatgagaaaacacatgtccttgtatta
tatcctacacttgcattagcgaatgatcaaataaagcggataagagagtatttgagcctg
ataaataaggagccgatccaactcgatagtgttcgtagagcggagcttgaagcaagtatt
gggaagagagggttaagagaccttataggaaaaaccaacattataatatctaatccagca
tttatcctacacgatgttaagaaacatttattacatcctactcgttcacccttgtatagt
ttctataaacgcttagacatgattgttgttgatgaaatagatttttatggtcctagaagt
cttgcattactacttgcactactcagaatactatcagaatatagcgatgtaaaaccacaa
atcgccgtattaaccgctacattgtctaatcccgaagatctaggtaagtatttaaaagat
ataacaagtcgggaatacgaagttgttcagggtaaaccgtttaatgtagataatcatcaa
tacattattctaggtaaaaacctcgagaatatctggaagatcctagtaaacaataaagaa
ttagttgaaaacatcggagatcctactataagaaaagaattactcaacgctattgattca
tttaaatattttgtcgaaaacatacatagaataatttctattgctcattcacagggaata
gatcttccttcaccaagtattgattatggagaaataattaatgagtatttcaaagacgac
tatgttacgctagtatttacatatagtatttctatggcggaggaagttgttagaaccatt
aagcatagatatggagaagataagcctatagcttctcatcaccatctagttcctaagaag
aagagagaggaaatagaggagaaggcccggaaaggattaataaaagtaatagtttctcct
agaacattatctcaaggcatagatataggcacaattgctagaatagtacatttagggtta
ccgagcgatgtacgtgaatattatcagagggaggggcgtaagggtaggaggaaagaatta
ggatttgcagagacagttatcatacctttctctaggtgggataaagaactattgtctaga
ggattcgatgtattcgagaaatggcttgggctaggtattgagaaaacacttgttaatcca
gataacctctacatttacttgtttactggtttagcaaagctattatcaccttggtataga
gaaaaacttaatgaactagaggaaaaagctcttaagaaagcaggtgttctcacgaaaaaa
ggcatcaatgaaaaccttatgaaatggatttttgaaagaattaatttctacgagttcgca
cccccctatggaataaaaagatacctagtaaaaggcgataaactgatccctctagaacct
attgggcattgtgatttagtcgagaagttccagcctggaaacattgactactctgaggaa
gcaattataacacacctagatactgggaagactacacgttatgtgcgagcagtctatgag
aaaccgatacgtgaaataaacttttacagtgacgatgctttcgcagtagcgttagaagag
tatagatatattaagatgaattggggggagaaaccaaatattatgcgagacatattagct
ggtagactaacatctgaagaactctgtgttgtctatactccatggaatggtttcgggaag
tataggaaaatacctgatagatgtatatggaaactgagatcggagaagccaagggttcta
gttcgtggagataaagctattgtatattatgatcgtagacaaatatatgttcctaaaccg
acggctggagaatatagagactatacgtacggttatttatacagcgttgatcctggagag
aacagtgatctgttaagactgggtttagcactgctaatgatcgtgttaaggagattatac
ggtatagcatttgaaacaataatgtatgacgtcataaaactaggggaatacaagtatttc
agtctccacgaaccagaagcagctggaataattgataaaattaactggctagatgttagg
aggaaaatcgaggaatacaagtttactgatttagacactatattattatcagaaatagat
gatatatcctattcgatactaatatcttatgattttgaatgggaaataattaggcaacaa
atgcttcgtattatagattatattttggctagagataaaattaaggtattatttagtgga
aaagaaatagtagtgcctaagcctagtccagcattgaaattattagcgttgtcgttaatg
gttgaagtagtaggcgaagaaactgaattaccacgtatacttgtagcaataaatgcttat
gatggagaaaaacattatccagcaattgctctatatccacccataccatatattaaacct
ccccatgaaattcttgatgttgagaaaaaacttttagaaaagatcatgtatgaagactat
aagatcattatacctaataaggagaaaacattatatcagctgaaaactgcgaacatgaaa
caattagcattaattattggaaatatgccggataaaacaattgatataacacaaaaaatc
caaacaataaatcttaagaatgtttcattccaagaactagcgatacaatatactggacaa
gaaaaaacagtaaacccatcaaggatacgggaaatactgaagaccatccgtgaaaaaatg
accatatatgaaacacatagaaaacaaatcatagaatatcttagaaacatgtcggaaaca
acatatttatcatatctaatcatacaagctttgataaatgaaatcaaacaataa
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