Staphylothermus marinus: Smar_0627
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Entry
Smar_0627 CDS
T00485
Name
(GenBank) protein of unknown function DUF402
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
smr
Staphylothermus marinus
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smr03009
]
Smar_0627
Ribosome biogenesis [BR:
smr03009
]
Prokaryotic type
rRNA processing factors
Smar_0627
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Gene cluster
GFIT
Motif
Pfam:
DUF402
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ABN69734
UniProt:
A3DM74
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Position
641455..642888
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AA seq
477 aa
AA seq
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MCTGVRVRGITATAVSKILLDKGYRIVQASNIIRERFNLPLDTSPADVTVKDADKDELLV
LGFYGHADKVYNDLVDELEYSFKWVSPVGLHSIHLGLIRDRVGDKCIVEIGNNVKGVLPR
CNMDIGKKVLVGVAKAPIKPGEEALLTRSIRVVGKYVSIIYGKPSLTISEHIRDHDKREY
LLAIAMSKIMGSGLGVHLRSSSQYAGKDEIEREIDELKQKLRELLDKAKHIEDAPTILYE
GEFIGLIGLTSLAKEKLDSYRDKVVPTITRHHSLKSCDNVMSDIVDYSEILLRHGISRKI
IYDALSDYILEKNRSLPKIRIIHIKPDGTTHTLSPGTIYEIVKSEKGVKIVLKRTLRNIG
VYDGLGVEKKPGDIDYMVIEENSWIISHNYYRGNEWLGSYININTPPEILPGIIKYHDLL
IDVIVKNTGEARIIDEEELKTYYEKEIIPEKLYEKALEVAKSILENHRLLIYRPNQQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtacgggtgttagagttagaggtattactgcaactgcagtttccaagatattatta
gataaaggatatagaatagttcaagcaagcaatattatacgtgaaagattcaatcttccc
ctagacacttctccagctgatgtgaccgttaaagatgctgataaggacgaattactagta
ctgggcttctatggccacgctgataaagtatacaatgatctcgtggatgagctagagtat
tctttcaaatgggtttcaccagtaggattacacagtatacatctaggcttgattagggat
agagtaggggataaatgcatagttgagataggaaacaatgttaaaggagtgcttccccgg
tgtaacatggatattggcaagaaggttttagttggagtagctaaagcccctattaagcca
ggcgaagaagctttactaacacgtagtatccgagtagttggtaaatatgtttccataata
tatggaaaaccttcactaacaatatcggagcacatacgtgaccatgataaaagagagtat
ttactagctattgccatgtctaaaataatgggttcagggctaggagttcatttaagaagc
agtagtcaatatgctggaaaagatgaaatagaaagggaaatagatgagttaaaacaaaaa
ctaagagaactactagataaagctaaacacatagaagatgctcccacaatactttatgag
ggagaattcataggtttaatagggctaaccagtctagcaaaagaaaagcttgattcatat
agagacaaagtagttcctacaattactaggcatcatagccttaaaagctgtgataatgtt
atgagcgatatagtagattactcggagatccttctaaggcacggcatctctaggaaaata
atatatgatgcattatcggactatattttggagaagaacaggtctctcccaaaaataaga
attattcatataaaaccagatggaacaactcatacattatctccaggaacaatatatgag
atagtgaagtctgagaaaggagtaaagattgttttaaagagaacattgaggaatatagga
gtctatgatggattaggcgtggagaagaagcctggagatatagattatatggtgatcgag
gagaactcatggattataagccataactactaccgcggaaacgaatggcttggttcatat
ataaacataaatacaccgccagaaatacttcctggtatcattaaatatcatgatctatta
atagatgttattgtgaaaaatactggtgaagcacgtataattgatgaagaagagcttaaa
acatattatgaaaaagagattatacccgagaaactatatgagaaagcactagaggtagct
aagtctattctggaaaaccatagattgttaatttatagaccgaaccaacaatag
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