Staphylothermus marinus: Smar_0802
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Entry
Smar_0802 CDS
T00485
Name
(GenBank) DNA-directed RNA polymerase, subunit B' / DNA-directed RNA polymerase, subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
smr
Staphylothermus marinus
Pathway
smr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Smar_0802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smr03021
]
Smar_0802
Enzymes [BR:
smr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Smar_0802
Transcription machinery [BR:
smr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Smar_0802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ABN69903
UniProt:
A3DMP3
LinkDB
All DBs
Position
798850..802320
Genome browser
AA seq
1156 aa
AA seq
DB search
MSSSNKFPTPDDLWTVMKSFFEEFGLVRQHLDSYNRFIDHLLPEIISEHKEITISGNRKL
LIKGYRIGSEPKIRTIEGFERTVTPLECRLRNFTYAVPIYLKVALQDETGIYKEQEIKLM
DLPVMLKSKIDPLSKMTAEELVAIGEDPKDPGGYFIINGSEKVLVAQEDLASNNILVDYA
SEGSSATHIAKVISVAKGRRSQLVIERRKDGIFYANLHGHRIPVVILMTALGLASELEIT
YAVSLDPDLQTYLLPSIMQAQSVFPRLEIPENASPEEQKRIEEEHRRKTIETALDYIGAR
IAIGRPREERIRRAQRALDEYLLPHIGTEPTPEVRRKKAYFIGQMVNKLIELIVDRRKPD
DKDHYRNKRLKLAGDLLAQLVRHNLVTYFIREVKSSIERSYSKYGRLDLKLVIKPGMLTD
RILHAMATGNWPGGKTGVSQLLDRTNLMSTLSHLRRVVSPLKRTQPHFEARELHPTQWGR
MCPFETPEGANIGLVKNLALMAHVSVGVPEEHIEPILYRKLGVKNLDEIIEEIKKAITGE
VEEYPDYTSWSRVYLNGRLIGYHPDGKKLAQEIRNLRRRGKISVEVNVAHIRDEHLNEVY
INTDAGRIRRPLLVVENGKLKLKPEHIAKLKSGEWKFSDLVKRGIIEYLDADEEEEAYIA
LTPDQITPEHTHMEIWTPAIMGITASIIPYAEHNQSPRNSYEAAMAKQSLGLYSANFQQR
MDTRGHLLHYPQKPLVQTRAMEVNGYNERPAGQNMVVAVMSFTGYNIEDALIMNKSSVDR
GLARSTFFRLYTTVEYRYPGGQEDRIMIPPSNVRGYRGPKAYEKLDEDGIVSPETPVKGG
DVLIGKISPPRFMTAQEYTVGAGITRQDASVVTRHGEKGIVDVVMVTTDIDGNRLVKVRV
RDLRIPELGDKFASRHGQKGVIGLLVPQQDMPFTEEGIVPDLIINPHAFPSRMTVGQLIE
SIAGKAAALEGRFVDATPFHKEPIDNLMITLKRHGYPMSGYETMYDGRTGEILKTPIFIG
IVYYQKLHHMVADKIHARARGPVQILTRQPTEGRAKEGGLRFGEMEVDCLVGHGASLLLK
EQMLDKSDKTTIYVCELCGHIGYYDRIRGKYMCPIHKDKGKLKPVEVSYAFKLLVQELMS
MCIMPRLKLEDIHKKI
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagctctaataagttcccaaccccagatgatttatggactgtaatgaagagcttc
tttgaagaatttggacttgttagacaacatctagacagctataatagatttatagatcat
ttattgccggaaataataagtgaacacaaagaaataacaatatcgggcaataggaaatta
ttgattaaaggataccgtataggcagcgagcccaagattagaaccattgagggatttgaa
agaacagttacacctctagaatgtagattgaggaactttacatacgctgtacctatctat
ttaaaagttgcattacaagatgaaaccggtatttataaagaacaagaaattaaattaatg
gatctcccggttatgttaaaatccaaaattgatccattaagtaaaatgaccgctgaggaa
ctagttgctataggtgaggatcccaaagatcccggtggttactttattattaatggtagt
gaaaaagtacttgttgcacaagaggatctagccagtaacaatatactagttgattatgca
agtgaagggtcttcagcaactcatatcgccaaagttataagtgtagctaaaggtaggagg
agccaattagttattgaacgaagaaaagacggtattttctatgcaaatctccacggccac
cgtattcccgttgttatattaatgactgctctaggcttagcatctgaactcgagataact
tatgctgtcagcttagaccctgatctacaaacctatttattaccctcaattatgcaggct
caatcagtatttccaagactagaaataccagaaaacgcttctcccgaggaacaaaaaaga
atcgaggaagaacataggaggaaaacaatagagacagcactagactatattggtgctaga
atagctattggtaggcctagagaagaacgtataagaagagcgcaaagagcactagatgaa
tacttactaccacatataggcaccgagccaacccctgaggttagacgtaagaaagcatat
tttatagggcaaatggtgaataaactaatagaactcattgttgatcgtagaaaacccgat
gacaaagatcattatcgtaataagagacttaaactagccggcgacctcctagcccagctt
gtaagacacaatctagtaacgtactttataagagaagtcaagagcagtattgagagaagc
tatagtaaatatggaagactagatcttaaactggttatcaaacctggaatgttaacagat
agaatactacatgcaatggctacaggaaactggcccggcggaaaaacaggtgtaagccag
ttattggatagaacaaacctaatgagcactctgagccatcttagaagagtagtatctcca
ctaaaacgtacccaaccacattttgaagcaagagagcttcatccaacacaatggggtaga
atgtgcccattcgaaacacctgaaggagcaaatattggtcttgtaaagaacttagcatta
atggctcatgtcagtgtaggtgtgccggaggagcatatagagcctatactatatagaaaa
cttggagtaaagaatttagatgaaattattgaggaaatcaaaaaagcgatcacaggtgag
gtggaagaatatcctgattatacttcttggagccgtgtatatttaaatggtagattaatt
ggatatcatcctgatggtaaaaaacttgcacaggagatcaggaacctgagaagacgggga
aagataagtgtagaagtaaatgtcgcgcatatacgggatgagcacttaaatgaagtatat
ataaacacagatgcaggtagaataaggaggcctttattagttgttgagaacggcaaactt
aagctgaaaccagaacatattgcaaagctcaagtctggcgagtggaagttcagcgatctt
gtgaagagaggaattattgaatacctagatgcagacgaggaagaagaagcatatattgca
ttaacccctgaccaaatcacgccagaacatacacatatggagatatggacacctgcaata
atgggtataacagcctcaataatcccctacgctgaacataatcagagcccgagaaattct
tatgaagcagcaatggcgaagcaaagcttaggactttactctgctaatttccagcagaga
atggatacacggggtcatctactacattatccacaaaaaccattagtgcagacaagagct
atggaagtaaatggttacaatgagagacctgctggacaaaacatggttgtagcagtaatg
agcttcactggatacaatatagaagacgcattgatcatgaataagagcagtgtagatcga
ggattagctagaagcactttcttcaggctctacacaacagttgaatataggtatcctggc
ggacaagaagatagaatcatgattcctccaagcaatgtccgaggttatcgtggaccaaaa
gcatatgagaaactcgacgaggatggaatagtttcgcctgaaacacctgttaaaggagga
gatgtactaataggaaaaataagcccgccaagattcatgacggcccaagaatacactgta
ggggcaggaataactcgtcaagatgcaagtgtagtaactagacatggagaaaaaggtatt
gtagacgtggtaatggttactacagatattgatggaaacagactagtgaaggtacgtgta
agagatcttagaatacccgagttaggagataagttcgcttcaagacatggacaaaaaggt
gtaataggcttactggttccacaacaagatatgccgtttacagaggagggaatagttcct
gatctaataattaatccacacgcatttccatcaagaatgactgttggacaattaattgaa
agcatagctggtaaagcagctgcgcttgagggaagatttgttgatgcaacaccattccat
aaagaaccaatagataacttaatgatcacattgaagagacatgggtacccaatgagtgga
tacgagacaatgtacgatggtagaacaggtgaaatcctcaagacaccaatattcatagga
atagtgtattatcagaaactacaccatatggtagccgacaaaatacatgcacgtgctcgc
ggaccagtacagatactaactagacaaccaactgagggaagagctaaggagggaggtctc
aggttcggtgagatggaagttgactgcctagtaggtcatggagcatcattgttattgaaa
gaacaaatgctggataaaagtgataaaacaactatatacgtatgtgaattatgtgggcac
ataggatactatgatcgtatacgtggaaaatacatgtgccccatacataaagataaaggt
aaacttaaacctgtagaggtatcctatgcattcaaactcttagtccaagaattaatgagt
atgtgcataatgccacgtttgaaactagaagatatacacaagaagatctag
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integrated database retrieval system
