Staphylothermus marinus: Smar_0857
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Entry
Smar_0857 CDS
T00485
Name
(GenBank) Shwachman-Bodian-Diamond syndrome proteins
KO
K14574
ribosome maturation protein SDO1
Organism
smr
Staphylothermus marinus
Pathway
smr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Smar_0857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smr03009
]
Smar_0857
Ribosome biogenesis [BR:
smr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Smar_0857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
DUF2746
DUF1949
Motif
Other DBs
NCBI-ProteinID:
ABN69957
UniProt:
A3DMU7
LinkDB
All DBs
Position
842632..843327
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AA seq
231 aa
AA seq
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MPEKHVIARYEAKGHRFEILVNPDLALKVKEGKTVNIDELLVGDYVYKDARKGLKASPES
LKAVFGTDDIKKVALEIIKRGEIHLTAEQRRKIIENKRRQIISLIARNAIDPKTKLPIPP
KRIELAMEQARVSIDPFKSPESQVEEIVSKIARIIPIKIAKAYIAVKVPPQFSGKAYKVL
SSIGEIKKSNWLSDGSLLVEIEIPAGMQEEFIERINKLTHGSANIKVLYVR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaaaaacatgttattgcaagatacgaagcaaaaggtcataggtttgagattctg
gtaaatcctgatcttgctcttaaggttaaggagggaaaaactgtaaatattgatgaatta
ttagttggggattatgtctataaagatgctaggaaaggattaaaggcttctccggaaagc
ttaaaagccgtttttggcacggatgatataaagaaggttgccttagagatcattaaacgt
ggagaaattcatttaacagctgaacagagaaggaaaattattgaaaataagaggagacaa
attattagtttaatcgctagaaatgccatcgatcctaagactaagcttccaatacctcct
aagcggatagaacttgcaatggaacaagctagagtatcgattgatccttttaaaagtcca
gaatcacaagttgaggagatagtttctaaaattgcgagaataatacctataaagatcgct
aaagcatatattgcagtaaaagtcccgcctcaatttagtgggaaggcatataaagtttta
agtagtattggagagataaagaaaagcaattggttaagtgacggaagcctactagttgaa
atcgagatccctgctgggatgcaggaagaattcattgaaagaatcaataaattgacacac
ggatctgcgaatataaaagtgttatatgtgaggtga
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