KEGG   Staphylothermus marinus: Smar_1002
Entry
Smar_1002         CDS       T00485                                 
Name
(GenBank) DNA polymerase sliding clamp subunit B
  KO
K04802  proliferating cell nuclear antigen
Organism
smr  Staphylothermus marinus
Pathway
smr03030  DNA replication
smr03410  Base excision repair
smr03420  Nucleotide excision repair
smr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Smar_1002
   03410 Base excision repair
    Smar_1002
   03420 Nucleotide excision repair
    Smar_1002
   03430 Mismatch repair
    Smar_1002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smr03032]
    Smar_1002
   03400 DNA repair and recombination proteins [BR:smr03400]
    Smar_1002
DNA replication proteins [BR:smr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Smar_1002
DNA repair and recombination proteins [BR:smr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Smar_1002
   MMR (mismatch excision repair)
    Other MMR factors
     Smar_1002
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Smar_1002
SSDB
Motif
Pfam: PCNA_N PCNA_C DUF960 Hus1 DUF6106 DUF5673 Rad9 HxlR
Other DBs
NCBI-ProteinID: ABN70100
UniProt: A3DN90
LinkDB
Position
complement(976261..977019)
AA seq 252 aa
MFRASYTATSKFKYIAQTIAKITDEAPFYATQDALEVRVLSPDKTTLTIVKIPSIAFEEY
EVDGEKYFVIGADELNKIVKRGTRNDILVFELDEEKNQLKIIFRNKKTGIERSFVIETKP
RTLEKIPEPQIDLGVTARFVADDYKHIIRDLKIIGEEAVLHYKEGKLYIYSHAEQKEYRG
EFSEGNPLTYLSATIDEARAKYSVGLLEATLKPIQAAKFVTVSFDRDKPVKIEFEITEGG
YIVYWIVPRIEA
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtttagagccagttacacagctacatcaaaattcaaatatatagcacagacgatagct
aagataactgatgaggcaccattttatgctacacaagatgctttagaagttagagttctc
agcccagataaaacaacacttaccatagttaaaataccatccatagcttttgaagagtat
gaggtagatggagagaaatactttgtgattggagccgacgagctaaataagatagtgaaa
agaggaactagaaacgatatcttagtatttgagcttgacgaagaaaagaaccagttgaaa
attattttcagaaacaagaagaccggtattgagagaagctttgttatcgaaacaaagcct
agaacattggagaaaatacccgagccacaaatagatcttggggttacagctaggtttgtc
gctgatgattataaacacataattagggacttgaagataattggggaagaagcagtactt
cattataaggaaggaaaactctatatatattctcatgcagaacaaaaagagtatagagga
gaattctcagaaggaaacccgctcacatatttatctgcaacaatagatgaagcacgtgct
aaatacagtgttggattattagaagccacactcaaacctattcaagcagcaaaatttgta
acggtatcgtttgatcgagataaacccgtgaagatagagtttgaaataacagagggcgga
tacatagtatactggatagttccaaggattgaagcataa

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