Staphylothermus marinus: Smar_1137
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Entry
Smar_1137 CDS
T00485
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
smr
Staphylothermus marinus
Pathway
smr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smar_1137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smr03021
]
Smar_1137
Transcription machinery [BR:
smr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Smar_1137
Prokaryotic type
Archaeal type
TFB
Smar_1137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cyclin_N
Sigma70_r4
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_Crp_2
DUF6674
RB_B
Sigma70_r4_2
TMP_3
HAAS
Motif
Other DBs
NCBI-ProteinID:
ABN70232
UniProt:
A3DNM2
LinkDB
All DBs
Position
complement(1098192..1099121)
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AA seq
309 aa
AA seq
DB search
MSNPVNTSPKDKQKCPEDQIIYDPEMGEYICLLTGEVIEEKVIDDRPEWRAFTPEERERR
SRIGGPLTSTVHDRGLATAIDYSNKDATGKRLEPRRRLEIQKLRRWQARSRIQSSIERNL
AQAMNELDRLSDQLNLPRNVKEEAARIYRRAVEKGLVRGRSIESVIAAAIYAACRELKIP
RTLDEIAKHTKSSRKDIARCYRLLLKELDIKVQTSDPIDFIPRIAHALNLSGSVMKKAAE
ILHRARSLGVTAGNDPAGLAAAAVYIAAQLSGERRTQKEIAHVAGVTEVTVRNRYKELAK
ELGIDLPTT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccagtaaatacttctcccaaagataaacaaaaatgtccagaagatcaaata
atttatgatccagagatgggagaatatatttgtttattgacaggcgaagtaatcgaagaa
aaagttattgatgatagacctgagtggagagcttttactccagaagagagggagagaaga
agcagaataggaggaccattaacaagcactgtccacgatagaggattagctaccgcgata
gattattcaaacaaagatgctacaggcaaaagactagaaccacgtagaagactagaaata
cagaagcttcgaagatggcaagcaagatcaagaatacagagcagtattgagagaaaccta
gcacaagcaatgaacgagctagaccggttatcagaccagctcaacctacctagaaatgtg
aaagaagaagccgctagaatttatagaagagctgttgaaaaaggccttgtacgcggaaga
agcattgaaagcgtcatagctgctgcaatatatgctgcttgccgagaattaaaaattcca
agaactctggatgaaatagctaaacataccaagagtagtagaaaagatatcgctagatgc
tatagattactcctcaaagaactcgatataaaagtgcagacaagcgatcccatagatttc
ataccacgaatagcacatgctttaaatttaagcggtagtgtaatgaagaaagcagccgag
atccttcatagagctagatcattaggtgttacagcaggaaatgatccagcagggttagca
gcagctgcagtatatatagctgcgcaattatcaggtgaacgcagaacgcagaaagaaatt
gcacatgtagctggggtgaccgaggtaactgtaagaaatagatataaagagcttgcaaaa
gagttaggaatagatcttccaactacataa
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