Staphylothermus marinus: Smar_1236
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Entry
Smar_1236 CDS
T00485
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
smr
Staphylothermus marinus
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smr03016
]
Smar_1236
Enzymes [BR:
smr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Smar_1236
Transfer RNA biogenesis [BR:
smr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Smar_1236
Prokaryotic type
Smar_1236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ABN70328
UniProt:
A3DNW8
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All DBs
Position
complement(1202764..1203519)
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AA seq
251 aa
AA seq
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MNTKIYMLGTGAAMPISRGLPCIALRIDSNIYLLDVGEGCQQRLFKAGLGLVKINAVMIT
HLHGDHYLGLFGMFQSMHLSNRKNELYLIAPAKLKDLLKEFIELGLAKIEYPLYFVEARE
GELYRDSKISVEAFKVVHGIEAYGYILMLKNGKRIVYTGDTKPFEELESIAKNADILIHE
ATFTSDLRKEAWEQGHSTAADAAITAYKAGVKELVLTHISSRYKDVEPLFVDAYRYFRNV
VVAEDYMVIYL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaaatttacatgttaggcacaggagcggccatgcctatatctagggggcta
ccatgtattgctttaagaatagattccaatatatatttactagatgttggagaaggttgc
caacaaagattgtttaaagctgggcttggattagtaaaaatcaatgctgtaatgattact
catctccatggagaccattatctcggattattcgggatgtttcaatcaatgcatttatct
aatagaaaaaacgaactatatttgatcgctcctgctaaactaaaggatctcttaaaagaa
ttcatagaactaggcttggctaaaattgagtatccactttattttgttgaagcaagagag
ggagaattatatagggatagtaaaatcagtgttgaggccttcaaagttgttcacggaatt
gaagcatacgggtatatattaatgcttaagaatggtaagagaattgtatataccggcgat
acaaaaccttttgaggaactagaatctattgcaaagaatgctgatatattgattcatgaa
gctacttttacaagtgatttaaggaaggaagcatgggagcagggtcattcaacagcggct
gatgcagctattactgcgtacaaagcgggtgtgaaggagcttgtattaactcatattagt
tctagatacaaggatgttgaaccattatttgtggatgcatatagatattttagaaacgtg
gttgttgctgaagactatatggttatatatttataa
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