Staphylothermus marinus: Smar_1250
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Entry
Smar_1250 CDS
T00485
Name
(GenBank) Zinc finger, TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
smr
Staphylothermus marinus
Pathway
smr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Smar_1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smr03021
]
Smar_1250
Transcription machinery [BR:
smr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Smar_1250
Prokaryotic type
Archaeal type
TFB
Smar_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
KORA
Lar_restr_allev
Zn_ribbon_10
DUF632
RH_dom
RNase_E_G_Thio
Ribosomal_S27e
DUF5817
A2L_zn_ribbon
zf_UBZ
Zn_ribbon_IS1595
HTH_Tnp_ISL3
Zn_ribbon_tTFIIB
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ABN70342
UniProt:
A3DNY2
LinkDB
All DBs
Position
1214513..1215397
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AA seq
294 aa
AA seq
DB search
MKYEHNQLVCPYCGSHSVIFDYETNEYVCTRCGAVIEDHLIDHGFEHRYIDNFENARTSG
SYTFRVHDSGIGSTEFKARYAGKWLNMSRLQKKIRVEKRNKIVEKALRHLNNYIRILNPP
KYVSETAGLILQKSVEGKNYKDKTLKLLAIASLYIAYKVHGIPKSAKMFAKELGITLKDL
WRAEKKIHDNVKDINKMIKKDEPENYVPYIVNRLSLSERVQYLANYIIQLSKKAGLNNGK
SSVGLATAAVYIASILLNEKRTQIDVAKTVNVTDVTIRNRYSDIVRSFDITISI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtatgaacataatcaactagtttgcccatattgtggaagccactcggttattttt
gattatgaaacaaatgaatatgtttgtacacgatgcggtgctgtaatagaagatcatcta
atagatcatggtttcgagcatagatacattgataattttgaaaatgctagaacaagtggt
tcatatacttttagagttcatgactctggaataggtagtacagaattcaaagctagatac
gcaggtaaatggttaaatatgagcaggctccagaagaaaatcagagtagagaaaaggaat
aagatagttgaaaaagctctccgtcacctaaacaattatattagaatacttaatccacct
aaatatgtttcagaaactgcaggcttgatcctacagaaatctgttgagggtaaaaactat
aaagataagacattgaagctattagcaatagcctctctttatatagcttataaagttcat
ggaatacctaaatcagctaagatgtttgctaaagagctagggatcactctaaaagattta
tggcgtgctgaaaaaaagatacatgataatgttaaagacattaacaaaatgataaagaaa
gatgaaccagaaaactatgtcccctatatagttaatagattatcattatcggaacgagtc
cagtatcttgctaattacattatacaattatccaaaaaagctggattaaacaatggaaaa
agctcggtcgggctagcgactgctgcagtatatattgcatcaattctccttaacgaaaaa
agaacacaaatagatgttgccaaaacagtaaatgtaacagatgttactattaggaataga
tatagtgatatagttagatcctttgatataactataagtatatag
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