KEGG   Staphylothermus marinus: Smar_1346
Entry
Smar_1346         CDS       T00485                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
smr  Staphylothermus marinus
Brite
KEGG Orthology (KO) [BR:smr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smr03400]
    Smar_1346
Enzymes [BR:smr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Smar_1346
    5.6.2.6  RNA 3'-5' helicase
     Smar_1346
DNA repair and recombination proteins [BR:smr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Smar_1346
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DUF6998 AAA_19 DUF4287 AAA_7
Other DBs
NCBI-ProteinID: ABN70437
UniProt: A3DP77
LinkDB
Position
complement(1304668..1307301)
AA seq 877 aa
MVIEFAKHKYSDRKILSMLRPYVAEWFSKTYKKFTPPQKMAIPLIKNGHNVLISSPTGTG
KTLAVFLGILDNLYAKAEKEGKLPEGVYVVYVSPLRALNNDMRRNLLKPIQGIREVAENH
GIDLPEIKVAVRTSDTSPYEKQKMIRDPPHILITTPESLAIALNAPKFRERLKNTRILIV
DEIHELANSKRGSHLSLSIERLENLVGKPLQRIGLSATIAPLVEVAKFLVGYRDDGEPRD
CLIVDARFSKPIDIKVIAPVKDLVHASAEEINNAIYSTLVKLIKKHRTTLVFTNTRSATE
RVVYKLRKIMEKERIVDIDEIEAHHSSLSRDVRLEIEEKLKQGKLRVIVSSTSLELGIDI
GYIDLVVLLSSPKSVSRLLQRIGRAGHHIRQVSKGRVIVVDRDDLVECTVLVKAAYQHKI
DRVRIPRNPLDVLAQHIVGLSLEKKWDIREAYRLIKRSYSFHTLSWSDYINVLKYLSGKY
GDYFEHAKVYAKIWFDENEGVFGRKRTARMIYYQNIGTIPDESKAHVFTIDGKYVGDLEE
AFVEYLIPGDLFVLGGRVYEYVKSVGFKVYVKPAEGARPTVPSWFSEMLPLAYDSALEIG
KFRRLIAEKIINLPRSQVIDWLRKEYRLQRHAAESIYDYIKEQLLFTGGIIPSDKLIMIE
IFDEPGRRNIIVHSLFGRRVNAALSRAYAYIISNELGVNVKITVTDNGFMLTIPIKKSID
WALAFKKLTPENIEDILKKVLKRTEMLKRRFRHCAVRSFMILRRYRDRERSVHRLQINAE
ELLKAIEDLPDFPVLKETYREILEDYMHIEAAKEVLDNVRKGEIKISVMGPNNIPSPFSH
SIIVHGYSDVVLMEDMRKLLMLLHEKVIEYLRLRKLS
NT seq 2634 nt   +upstreamnt  +downstreamnt
ttggtaatagagtttgccaagcacaagtatagtgatagaaaaatattatctatgctcaga
ccatatgttgctgaatggtttagtaaaacatataagaaattcacaccaccccagaaaatg
gctattcctttgatcaaaaatggacacaacgtgcttatatcaagtcctacaggtactggt
aaaacattagctgtttttctaggaatacttgataacctttatgcaaaggctgaaaaagag
ggaaaacttcctgaaggtgtttatgtagtctatgtgagccccttaagagctttaaataat
gatatgcgtagaaacttgttaaaacctatacaggggatcagagaagtagctgagaaccat
ggtattgatctcccagagataaaagtggctgttagaacaagtgatacaagcccgtatgag
aaacagaaaatgataagggatccaccacatatattgatcacaacacctgaaagcttagca
attgcattaaatgctcccaagtttagggaacgattaaagaatactagaatactaatcgta
gatgaaatacatgaactagcgaatagtaagagaggaagtcatttaagtctaagtattgaa
agactagaaaacctagttggaaaaccgcttcaaagaataggattgagtgcaacaatagct
cctctagtagaggtggctaagtttctcgttggatatagagatgatggcgaacctagggat
tgcctaattgttgacgcaagattttctaagccgatagatattaaagttattgctcctgtt
aaagacttagttcatgcttccgcagaagaaataaataatgcaatatattctacgcttgtg
aaacttattaaaaagcatagaacaacattagtcttcactaatacacgtagtgctacagag
agagttgtgtataaacttagaaagatcatggagaaagaaagaatcgtggatatagatgaa
atagaagctcatcatagtagtttgagtagagatgtccgccttgaaattgaagaaaaactt
aagcaaggaaagcttcgtgtaatagtaagctctacaagcttagaactaggaatagatata
ggatatatagacttagtagtactactcagtagtccgaaaagtgtttcaagactccttcaa
agaattggaagagcgggtcatcatattagacaagtaagtaaggggagagtaatagttgtt
gatagagatgatcttgttgaatgcactgtcctagtaaaagccgcatatcaacacaaaatt
gacagggtacgtatacctagaaatccactagatgtgcttgcacagcacattgtaggttta
tctcttgaaaagaaatgggatattagagaagcgtatagattaattaagagaagttattct
ttccacactttatcgtggagtgattatattaatgttctaaaatatctttcaggcaagtat
ggagactattttgaacatgccaaagtctatgctaagatctggtttgacgaaaatgagggg
gtctttggtagaaaaagaactgcgagaatgatctattatcaaaacattggtacgataccg
gacgagagcaaagcacatgtattcacaattgatggaaaatatgttggggatctagaagaa
gcttttgtggaatatttaattcctggggatctatttgttctaggtggacgcgtatacgaa
tacgtgaagagtgtggggtttaaagtatatgttaagccagctgagggggcaagaccaact
gttccaagctggtttagtgaaatgcttccgttagcttatgattcagcactagaaattgga
aaatttagaagacttatcgctgaaaaaataataaatcttcctcgaagccaagttattgat
tggttaagaaaagagtatagattgcagaggcatgcggctgagtcaatatatgattatatt
aaggagcaactattgttcactggaggaataattccgagcgacaaactcatcatgatcgag
atcttcgatgagcctgggagaagaaacattatagtacacagcctatttggtagaagagtt
aacgccgcattatctagggcttacgcatacataataagtaatgaattaggtgtgaacgta
aagataacagtaacagacaatggtttcatgcttacaattccaattaagaaaagcattgat
tgggctttggcgttcaaaaaactaacgcctgaaaacattgaggatattttaaagaaggtt
cttaaaagaacagaaatgcttaaaaggagatttagacattgtgcagtaagatcattcatg
attctaagaaggtatagagatagggagagaagcgttcatagactacaaataaatgctgag
gaattattgaaggctatagaggatctgcccgattttcctgttttaaaggaaacatatagg
gagatactagaggattatatgcatatagaagctgctaaggaagtattagataatgttaga
aaaggtgagattaaaatatccgtgatgggacctaataatataccgagcccgttctcgcac
agtataattgttcatggatatagtgatgttgtattaatggaagatatgagaaagttgctg
atgcttctccatgaaaaagtaatagagtatcttaggttgagaaaactatcttag

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