Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_008
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Entry
SMDSEM_008 CDS
T00958
Symbol
gyrA
Name
(GenBank) putative partial DNA gyrase A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sms03032
]
SMDSEM_008 (gyrA)
03400 DNA repair and recombination proteins [BR:
sms03400
]
SMDSEM_008 (gyrA)
Enzymes [BR:
sms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SMDSEM_008 (gyrA)
DNA replication proteins [BR:
sms03032
]
Prokaryotic type
DNA Topoisomerases
SMDSEM_008 (gyrA)
DNA repair and recombination proteins [BR:
sms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMDSEM_008 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
PINIT
Motif
Other DBs
NCBI-ProteinID:
ACU52741
UniProt:
C7LJX9
LinkDB
All DBs
Position
10437..11996
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AA seq
519 aa
AA seq
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MEKIISINLEEEIKASYIDYSMSVIVSRALPDGKDGLKPVQRRVLYGMYEQGAFKNYRKS
ARIVGDVLGKYHPHGDSSVYEAIVRMAQSWSLRYPLIDGQGNFGSIDNDPPAAMRYTEIK
LQKVSEEMLFDLKKDTVDIKLNFDSSCKEPIVLPTVIPNLLINGSSGIAVGIATNMPPHN
IVESINAICSYIENTDISIEELMKDIIAPDFPTGGIIYGYEGVKKAFLTGRGKILLRSKV
FFEKIGGCYCLIIKEIPYQIRKEDLIKKTLKLIKEEKLEGISKIRDESDRTGMRIVFYLK
KNVNKHLLLKNIFKYTPLETTFSVNNIALVNGKPVQLNLKDIIKHFVNHRHEVLIRRSKF
DLKNAKEKAHIIKGFYLVLDNIETVIELIKSSKEKNHAKKKLLIKFNLSEKQVKAILNLK
LNSLTKLENEKIKKDYLKLKKDISYYTNIKTDIFFQKKIIKKELKQIKEKYGDLRRTQID
YLGIKSSLYDVMLFIKRFKVKKIKNIKDKNYNEEKICNY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattatttcaataaatcttgaagaggaaataaaagcttcatatatagattat
tctatgtctgttattgtttctagggcacttcctgatggaaaagatggcttaaaacctgtt
cagagacgagttttatacggaatgtatgaacaaggagcctttaaaaattatagaaaatct
gctagaattgtgggtgatgtgttagggaaatatcatcctcatggagatagttcagtatat
gaggctatagtaagaatggcacaaagttggtctttacgttatcctttaatagatggtcaa
gggaattttggatctatagataatgatcctcctgcagcaatgagatatactgaaattaaa
cttcaaaaagtctctgaagaaatgttatttgatcttaaaaaagatacagtagatataaaa
cttaattttgattcttcttgtaaagaacctatagtacttccaactgttattccgaattta
ttaataaatggctcttcaggaatagcagttggaattgcgaccaatatgcctcctcataat
attgtagaatctataaatgctatttgttcttatatagagaatacagatatttcgatagaa
gaacttatgaaagatataatagctcctgattttcctacaggtggaattatatatggatat
gaaggtgtaaaaaaagcttttttaacaggacggggaaaaattttattaagatctaaagtt
ttttttgaaaaaataggcggctgttattgtttaattattaaagaaattccttatcaaata
aggaaagaagatttaataaaaaaaacccttaaattaattaaagaagaaaaattagaagga
atttctaaaattagagatgaatctgatagaactgggatgagaatagttttttatttaaaa
aaaaatgttaataaacatttattattaaaaaatatttttaaatatactcctttagaaaca
acatttagtgttaataatatagcattagttaatggcaaaccagtacaacttaatttaaaa
gatataataaaacattttgtaaatcatagacatgaagttcttattagaagatcgaaattt
gatttaaaaaatgcaaaagaaaaagcacatataataaaaggtttttatttagtattagac
aatatagaaactgtaattgaattaattaaatcttctaaagagaaaaatcatgcaaaaaaa
aaattattaattaaatttaatttatcagaaaaacaagttaaagcaattttaaatttaaaa
ttaaattcacttactaaattagaaaatgaaaaaataaaaaaagattatttaaaattaaaa
aaagatatatcttattatactaatataaaaactgatattttttttcaaaaaaaaataata
aaaaaagaattaaaacaaattaaagaaaaatatggagatttaagacgtacccaaatagat
tatttaggaataaaatcatctttatatgatgttatgttgtttattaaaagatttaaagtg
aaaaaaattaaaaatataaaggacaaaaattataatgaagaaaaaatatgtaattactaa
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