Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_059
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Entry
SMDSEM_059 CDS
T00958
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sms03016
]
SMDSEM_059 (truA)
Enzymes [BR:
sms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SMDSEM_059 (truA)
Transfer RNA biogenesis [BR:
sms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMDSEM_059 (truA)
Prokaryotic type
SMDSEM_059 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Ig_Shg
DUF7495
Motif
Other DBs
NCBI-ProteinID:
ACU52787
UniProt:
C7LK25
LinkDB
All DBs
Position
62863..63675
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AA seq
270 aa
AA seq
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MRFFIEISYKGSSLFGWQIQKKNLSIQETIETCLSFLLKKKIKIIGAGRTDTGVHAIQMF
AHFDLTFDLTFDLTFDLTFDLTFDLTFDLTKNHINNHFKSKLNSFLPLNIKIINIFSVKK
NIHARFNAISRVYEYRISLSKDPFLFQTSWQWLSKNQIELKILKKGANILKKYKDFSSFC
KEKSKKNLCEISTAKWILKKNILYFRIEANRFLRNMVRSLVGTLIELGIKKITIKDFIKI
IEAKNRNLAGITAPAKGLFLIKINYPLNIF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgagattttttatagaaatatcttataaaggatcatccctttttggatggcaaattcaa
aaaaaaaatctgtctatacaagaaacaatagaaacttgtttaagttttttattaaaaaaa
aaaataaaaattataggtgcgggaagaacagatactggagttcatgctattcaaatgttt
gctcattttgatttaacttttgatttaacttttgatttaacttttgatttaacttttgat
ttaacttttgacttaactttcgatttaacaaaaaatcatataaataatcattttaaaagc
aaattaaattcttttttacctttaaatataaaaattatcaatattttttctgtaaaaaaa
aatattcatgctcgttttaacgctataagtagagtttatgaatataggatttctttatct
aaagatccttttttatttcaaacaagctggcaatggttatctaaaaaccaaatagaatta
aaaattcttaaaaaaggtgccaatatacttaaaaagtataaagattttagtagtttttgt
aaagaaaaatctaaaaaaaatttatgtgaaatttccactgcaaaatggattttaaaaaaa
aatattttatattttagaattgaagccaatagatttttaagaaatatggtaagatcttta
gttggaacactaattgaattaggaataaaaaaaattacaataaaagattttattaaaata
atagaagcaaaaaatagaaatttagccggaataactgctcccgcaaaaggtcttttttta
attaaaattaattatccattaaatattttttaa
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