KEGG   Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_085
Entry
SMDSEM_085        CDS       T00958                                 
Symbol
dnaX
Name
(GenBank) N terminal region of DNA polymerase III, gamma subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sms  Candidatus Karelsulcia muelleri SMDSEM
Pathway
sms03030  DNA replication
sms03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SMDSEM_085 (dnaX)
   03430 Mismatch repair
    SMDSEM_085 (dnaX)
   03440 Homologous recombination
    SMDSEM_085 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sms03032]
    SMDSEM_085 (dnaX)
   03400 DNA repair and recombination proteins [BR:sms03400]
    SMDSEM_085 (dnaX)
Enzymes [BR:sms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SMDSEM_085 (dnaX)
DNA replication proteins [BR:sms03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SMDSEM_085 (dnaX)
DNA repair and recombination proteins [BR:sms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SMDSEM_085 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid Rad17 AAA_14 DNA_pol3_gamma3 RuvB_N AAA_22 RCF1-5-like_lid AAA_7 AAA_2 AAA_5 AAA_24 DEAD AAA_30 AAA_19 AAA_18 TIP49 RNA_helicase nSTAND3 DNA_pol3_delta_C Mg_chelatase ResIII AAA_assoc_2 Sigma54_activ_2 GNAT_acetyltr_2 DUF815 DEXQc_Suv3 RsgA_GTPase SRP54 VapE-like_dom TsaE NPHP3_N AAA_33 Sigma54_activat AAA_16 AAA_25
Other DBs
NCBI-ProteinID: ACU52804
UniProt: C7LK42
LinkDB
Position
93161..94204
AA seq 347 aa
MDYVVSYRKYIPRDFEEVIGQKNITETLKKAIEKKMLSKSFLFCGPRGVGKTTCAKILAR
KVNNFSDEEKNSMFNIIELDAASNNSVDDIRNIINQVNFRPQYGKYKVYIIDEVHMLSNS
AFNAFLKILEDPPSHVIFILATTEKNKILSTIISRCQVYDFNRISVNEITNYLIKICKKE
GIEFEEDALLLISEISDGSLRDALSIFDKLILDSNKRLLSYRVYNQLGLLDIEYCLKITN
LILKKEIYNVLLLFDEIIKKGVNINMFITSLSKHFRNLFLSKERRTIKLIYFSEKRKKEL
LIQSKKISKNFLKKALNLCNKTEITYKSNKDIRLALEIALINLTSIT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggattacgtggtttcatatagaaaatatataccgagagattttgaggaggtgataggt
caaaaaaatattacagaaactttaaaaaaagctatagaaaaaaaaatgttatctaaatct
tttttattttgcggtccgagaggtgtaggcaaaacaacttgtgccaaaattctcgctaga
aaagtaaataatttttctgatgaagaaaaaaatagtatgtttaatataattgaattagat
gccgcttcaaataattctgtagatgatataagaaatattataaatcaagtaaattttaga
ccccaatatgggaaatataaagtatatataattgatgaagttcatatgttatctaattca
gcatttaatgcttttttaaagattttagaagatcctccatcacatgtaatatttatatta
gcaactactgaaaaaaataaaatattatcaactataatttctcgttgtcaggtatatgat
tttaatagaatatctgttaatgagattacaaattatttaataaaaatttgtaaaaaagaa
ggaattgaatttgaagaagatgctttattattaatttcggaaatttcagatggatcttta
cgtgatgctttatctatatttgataaactaattttagattctaataagagattattaagt
tatagagtatataatcaattagggttactagatatagaatattgtttaaagattacaaat
ttaatattaaaaaaagagatatataatgtattattattatttgatgagattattaaaaaa
ggtgtaaacataaatatgtttataacttctttatctaaacattttagaaatctttttcta
tcaaaagagagaagaactattaagttaatttatttttctgaaaaaagaaaaaaagaattg
ttgattcaatcaaaaaaaatatctaagaattttcttaaaaaagcattaaatttatgtaat
aaaactgaaattacttataaatcaaataaggatataagacttgcattagaaatagcttta
attaacttaacttcaataacttaa

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