Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_085
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Entry
SMDSEM_085 CDS
T00958
Symbol
dnaX
Name
(GenBank) N terminal region of DNA polymerase III, gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Pathway
sms03030
DNA replication
sms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMDSEM_085 (dnaX)
03430 Mismatch repair
SMDSEM_085 (dnaX)
03440 Homologous recombination
SMDSEM_085 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sms03032
]
SMDSEM_085 (dnaX)
03400 DNA repair and recombination proteins [BR:
sms03400
]
SMDSEM_085 (dnaX)
Enzymes [BR:
sms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMDSEM_085 (dnaX)
DNA replication proteins [BR:
sms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMDSEM_085 (dnaX)
DNA repair and recombination proteins [BR:
sms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMDSEM_085 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
Rad17
AAA_14
DNA_pol3_gamma3
RuvB_N
AAA_22
RCF1-5-like_lid
AAA_7
AAA_2
AAA_5
AAA_24
DEAD
AAA_30
AAA_19
AAA_18
TIP49
RNA_helicase
nSTAND3
DNA_pol3_delta_C
Mg_chelatase
ResIII
AAA_assoc_2
Sigma54_activ_2
GNAT_acetyltr_2
DUF815
DEXQc_Suv3
RsgA_GTPase
SRP54
VapE-like_dom
TsaE
NPHP3_N
AAA_33
Sigma54_activat
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACU52804
UniProt:
C7LK42
LinkDB
All DBs
Position
93161..94204
Genome browser
AA seq
347 aa
AA seq
DB search
MDYVVSYRKYIPRDFEEVIGQKNITETLKKAIEKKMLSKSFLFCGPRGVGKTTCAKILAR
KVNNFSDEEKNSMFNIIELDAASNNSVDDIRNIINQVNFRPQYGKYKVYIIDEVHMLSNS
AFNAFLKILEDPPSHVIFILATTEKNKILSTIISRCQVYDFNRISVNEITNYLIKICKKE
GIEFEEDALLLISEISDGSLRDALSIFDKLILDSNKRLLSYRVYNQLGLLDIEYCLKITN
LILKKEIYNVLLLFDEIIKKGVNINMFITSLSKHFRNLFLSKERRTIKLIYFSEKRKKEL
LIQSKKISKNFLKKALNLCNKTEITYKSNKDIRLALEIALINLTSIT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattacgtggtttcatatagaaaatatataccgagagattttgaggaggtgataggt
caaaaaaatattacagaaactttaaaaaaagctatagaaaaaaaaatgttatctaaatct
tttttattttgcggtccgagaggtgtaggcaaaacaacttgtgccaaaattctcgctaga
aaagtaaataatttttctgatgaagaaaaaaatagtatgtttaatataattgaattagat
gccgcttcaaataattctgtagatgatataagaaatattataaatcaagtaaattttaga
ccccaatatgggaaatataaagtatatataattgatgaagttcatatgttatctaattca
gcatttaatgcttttttaaagattttagaagatcctccatcacatgtaatatttatatta
gcaactactgaaaaaaataaaatattatcaactataatttctcgttgtcaggtatatgat
tttaatagaatatctgttaatgagattacaaattatttaataaaaatttgtaaaaaagaa
ggaattgaatttgaagaagatgctttattattaatttcggaaatttcagatggatcttta
cgtgatgctttatctatatttgataaactaattttagattctaataagagattattaagt
tatagagtatataatcaattagggttactagatatagaatattgtttaaagattacaaat
ttaatattaaaaaaagagatatataatgtattattattatttgatgagattattaaaaaa
ggtgtaaacataaatatgtttataacttctttatctaaacattttagaaatctttttcta
tcaaaagagagaagaactattaagttaatttatttttctgaaaaaagaaaaaaagaattg
ttgattcaatcaaaaaaaatatctaagaattttcttaaaaaagcattaaatttatgtaat
aaaactgaaattacttataaatcaaataaggatataagacttgcattagaaatagcttta
attaacttaacttcaataacttaa
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