Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_114
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Entry
SMDSEM_114 CDS
T00958
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sms03016
]
SMDSEM_114 (trmE)
Transfer RNA biogenesis [BR:
sms03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SMDSEM_114 (trmE)
Prokaryotic type
Methyltransferases
SMDSEM_114 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Gtr1_RagA
GTP_EFTU
Dynamin_N
Roc
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
ACU52829
UniProt:
C7LK67
LinkDB
All DBs
Position
119149..120534
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AA seq
461 aa
AA seq
DB search
MLKEKDTIVAIATPSGYGAIAVIRMSGKNSLKIINNIFVSISLKKKLSENSINLGFIKIK
KKIIDKVLILVFKKPKSYTGEDVVEISCHGSMYIQNKILSIIIDQGARLANPGEFTLRAF
INGKIDLCQAESILDIVNSETLFSHELAINQMRGNISNIIKNLRKKIIDLLSLIELELDF
SEENLFVLNKREFQKILDNIIKKINDLIKSFKIGNALKNGILVSIIGCTNVGKSTLFNKI
LKDERSIVSNIAGTTRNYIEENLIINGIKFRFIDTAGINNKTKDYIEKLGIKKTYKNIKK
SDLILYVFDCLNEEIIMKNLKSLQEKYPKKKIFILINKYDLIKKNKKKINLRNYQDKDIF
HISAKYGYGIKNLLDEITFFSKKITSLKENSIIITQTRHYENLKKAIFYLYKVKEDLEKS
ISPEFLYISLQTALECLGQIIGEVTNEDILSNIFSKFCIGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagagaaggatactatagtagctatagctactcctagtggatatggagcaatt
gctgttatacgaatgtcaggaaagaattctctaaaaattataaataatatatttgtttct
atttccttaaaaaaaaaattatctgaaaattctataaatttaggatttattaaaattaaa
aaaaaaattattgataaggtattaattttggtttttaaaaaaccaaaatcatatactgga
gaagatgtagtagaaatttcttgtcatggttctatgtatatacaaaataaaattttgtca
ataattattgaccaaggagcaagattagccaatcctggagaatttactttacgtgctttt
attaatggaaaaatagatctttgtcaagctgaatcaatactagatattgtaaattcagaa
acacttttttctcatgagttggctattaatcaaatgcggggcaatatttcgaatataata
aaaaacttaagaaaaaaaataatcgatttgttatcattaatagaacttgaactagatttt
tctgaagaaaatttatttgtattaaataagagagaattccaaaaaattttagataatata
ataaaaaaaattaatgatctaataaaatcatttaaaataggaaatgcattaaaaaatgga
atattagtatctataataggatgtactaatgttggcaaatcaactttatttaataaaata
ttgaaagatgaaagatcaatagtatctaatattgcagggaccactagaaattatatagaa
gaaaatttgattataaatgggataaaatttcgttttatagatacagccggaataaataat
aaaacaaaagattatatagaaaaattaggaataaaaaaaacatataaaaatataaaaaaa
tctgatttaattttatatgtctttgattgtttgaatgaagaaattataatgaaaaattta
aaatctttacaagaaaaatacccgaaaaaaaaaatatttattttaataaataaatatgat
ttaattaaaaaaaataaaaaaaaaataaatttaagaaattatcaagataaagatatattt
catatatcagctaaatatggatatgggataaagaatttattagatgaaattacttttttt
tctaaaaaaattacttctttaaaagaaaattctataataattactcaaacaagacattat
gaaaatttgaaaaaagctattttttatctttataaagtgaaagaagatttagaaaaatca
atttccccagaatttttatatatatctttacagacagctttagagtgtttaggccaaata
attggtgaagtgactaatgaagatatcctatcaaatattttttctaaattttgtattgga
aaataa
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