Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_198
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Entry
SMDSEM_198 CDS
T00958
Symbol
groL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Pathway
sms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMDSEM_198 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sms03019
]
SMDSEM_198 (groL)
03110 Chaperones and folding catalysts [BR:
sms03110
]
SMDSEM_198 (groL)
03029 Mitochondrial biogenesis [BR:
sms03029
]
SMDSEM_198 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sms04147
]
SMDSEM_198 (groL)
Enzymes [BR:
sms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMDSEM_198 (groL)
Messenger RNA biogenesis [BR:
sms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMDSEM_198 (groL)
Chaperones and folding catalysts [BR:
sms03110
]
Heat shock proteins
HSP60 / Chaperonin
SMDSEM_198 (groL)
Mitochondrial biogenesis [BR:
sms03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMDSEM_198 (groL)
Exosome [BR:
sms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMDSEM_198 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SMDSEM_198 (groL)
Exosomal proteins of breast cancer cells
SMDSEM_198 (groL)
Exosomal proteins of colorectal cancer cells
SMDSEM_198 (groL)
Exosomal proteins of bladder cancer cells
SMDSEM_198 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
ACU52899
UniProt:
C7LKD7
LinkDB
All DBs
Position
complement(207831..209459)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKNIKFDIEARDKLKKGVDALANAVKVTLGPKGRNVVFQKSFGGPQVTKDGVSVAKEIE
LEDPIENLGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVEAVVNDLKKQSKKVGNEKIKQVASISANNDEAIGKLISVAFEKVGKEGVITVEEAKG
IETTVDVVEGMQFDRGYQSPYFVTNSEKMITEFDNPYILLSDKKISSMKDILPILEPVAQ
SGKPLLIISEEVEGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGTVIS
EETGSKIEDTKLEFLGKAERIIINKENTTIVNGSGNKKEIDSRVNQIKNQIEITTSDYDK
EKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRA
IKSLSSLKVDNVDQNTGIKIVKRSLQEPLRQIVANAGEEGSVIVAKVAEGKKEFGYDAKL
GEYKNMISEGIIDPTKVTRVALENAASVAGMLLTTDCVITEIKKEEPAMPAMPGNSGMGG
MV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatattaaatttgatattgaagctagagataaattaaaaaaaggagtagat
gcattagctaatgccgtaaaagtaactttaggtcctaaaggcagaaatgttgttttccaa
aaatcttttggaggcccccaagtcactaaagatggagtttcagtagctaaagaaatagaa
ctggaagatcctatagaaaatttgggcgcacaaatggtaaaagaagtagcttctaaaaca
aatgatatagcaggagatggaactactactgcaacagtattagcacaagctatagttcgt
gagggattaaaaaacgttgcagctggagcaaatcctatggatttaaaaagaggaattgat
aaagctgtagaagctgttgttaatgatttaaaaaaacaatctaaaaaagtaggtaatgaa
aaaataaaacaagtagcctcaatatctgctaacaatgatgaagcaataggaaaattaata
tctgttgcttttgaaaaagtaggtaaagaaggagtaattactgttgaagaagccaaagga
atagaaacgactgtagatgtagttgaaggaatgcaatttgatcgtgggtatcaatcacca
tattttgtaactaattctgaaaaaatgattacagaatttgataatccttatattttactt
tctgataaaaaaatttcttctatgaaagatattcttcctatacttgaaccagtggctcaa
tctggaaaacctttattaattatttcagaagaagtagaaggagaagcactggcaactctt
gttgtaaataaaattagaggagcattaaaagtagctgcagtaaaagctccaggttttgga
gaccgaagaaaagccatgttagaagatatagctatccttacagggggaacagttatttct
gaagaaacaggaagtaaaatagaagatacaaaattagaatttttaggaaaagccgaaaga
attattataaataaagaaaatactactattgtaaatggtagtgggaataaaaaagaaata
gactcacgggtaaatcaaattaaaaatcaaatagaaataacaacttctgattatgataaa
gaaaaacttcaagaaagattagccaaattagctggaggtgtagcagttttatatgtagga
gcagcatctgaagtagaaatgaaagaaaaaaaagatcgcgtcgatgatgcgttacatgct
acaagagcagcagtagaagaaggaatagttgcaggaggaggagtagcattggttagagca
ataaaatctttatcttctttaaaagtagataatgtagatcaaaatacaggaataaaaatt
gtaaaacgttctttacaagaacctttacgtcaaatagtggctaatgctggagaagaagga
tctgtaatagttgctaaagtagctgaaggaaaaaaagaatttggttacgatgctaaatta
ggtgaatataaaaatatgatttctgaaggtataattgatcctacaaaagtaacacgtgta
gcattagaaaatgctgcctcagttgcaggaatgttattaactactgattgtgttattaca
gaaataaaaaaagaagaacctgcaatgccagctatgccaggtaatagtggcatgggagga
atggtataa
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