Candidatus Karelsulcia muelleri SMDSEM: SMDSEM_263
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Entry
SMDSEM_263 CDS
T00958
Symbol
lysU
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sms
Candidatus Karelsulcia muelleri SMDSEM
Pathway
sms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SMDSEM_263 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sms01007
]
SMDSEM_263 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sms03016
]
SMDSEM_263 (lysU)
Enzymes [BR:
sms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SMDSEM_263 (lysU)
Amino acid related enzymes [BR:
sms01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SMDSEM_263 (lysU)
Transfer RNA biogenesis [BR:
sms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SMDSEM_263 (lysU)
Prokaryotic type
Other AARSs
SMDSEM_263 (lysU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
NDUFB10
Motif
Other DBs
NCBI-ProteinID:
ACU52961
UniProt:
C7LKJ9
LinkDB
All DBs
Position
complement(261100..262593)
Genome browser
AA seq
497 aa
AA seq
DB search
MNKNFLKFSDQEIIRRNKLDVIRKIGINPYPSEEYNVNATSKDVIKYYEYGKNVIISGRI
IRMRKMGKASFIEIKDNHGLIQIYLKRDYEFKTKYDFFLKKLLDIGDIIGIKGFLFKTKS
NKITVHAVDIKLLSKCLRVLPNVKKDETGKVHDSFEESEQRYRMRYLDLIVNDKTKKLFI
KRTKIIQYIRNYLNNKGYLEVETPVLQSIPGGAIARPFITHHNALNIPLYLRISNELFLK
KLIVGGLESVYEFSRNFRNEGIDKNHNPEFTILELYVSYKDYFWMMNFIEKLLEYLCIKL
YNKKLLKINNKLISFKTPFKKITILDSIKENTGFDLSGLNEKNIRNICKKLQLKIDKNMG
KAKLIEQIFSEKCEKKYINPTFIMDFPIEMSPLTKKHRSKKGLTERFELIINGNEIANSY
SELNDPIDQLKRFREQIKLFEKGDNEAMLIDWEFIRSLEFGMPPCAGIGIGIDRLIMLLT
NNKCIQEVLFFPQMRQI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaattttttaaaattttcagatcaagaaataatacgtagaaacaaacttgat
gtaattagaaaaattggaataaatccttatccttctgaagaatataatgtaaatgccaca
tcaaaagatgtgattaaatattatgaatatggaaaaaatgttattatttctggacgtatt
attagaatgagaaaaatgggcaaggcctcatttatagagataaaagataatcatggatta
attcagatttatctgaaaagagattatgaatttaaaaccaaatatgatttttttttaaaa
aaacttttagatattggagatattataggaataaaaggttttttatttaaaactaaaagc
aataagatcactgtacatgctgtagatataaaattactatctaaatgtttacgtgtttta
ccaaatgtaaaaaaagatgaaactggaaaagttcatgattcttttgaagagtctgaacaa
cgttatagaatgagatatttagatttaatagttaatgataaaactaaaaagctttttata
aagcgtactaaaataatacaatatattagaaattatttaaataataaaggatatttagag
gttgaaactcctgttcttcaatcaattccagggggagctattgctcgtccatttataact
caccataatgcattaaatattccattatatttacgtatttcaaatgaattatttttaaaa
aaattaattgtaggaggcttagaatctgtttatgaattttctagaaattttagaaatgaa
ggtatagataaaaaccataatccagaatttactatattagaattatatgtatcttataaa
gattatttttggatgatgaattttatagaaaaattattagaatatttatgtataaaatta
tataataaaaaattattaaaaattaataataaacttattagttttaaaaccccatttaaa
aaaattacaatattagattcaattaaagaaaatactgggtttgatttatctggattgaat
gaaaaaaatattagaaatatatgtaaaaaattacagctaaaaattgataaaaacatggga
aaagccaaattgattgagcaaatttttagtgaaaaatgtgaaaaaaaatatataaatcct
acctttattatggattttccaatagaaatgagtcctttaactaagaaacatagaagtaaa
aaaggattaactgaaaggtttgaattaataattaatggaaatgaaattgcgaattcatat
tctgaattaaatgatcctattgatcaattaaaaagatttagagaacaaattaaacttttt
gaaaaaggagataatgaagcaatgttaatagattgggagtttattcgttctttagaattt
ggaatgcctccgtgtgcaggaataggaattggaatagatagattaataatgttattaaca
aataacaaatgtatacaagaagtcttattttttcctcaaatgagacaaatttaa
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