Stenotrophomonas maltophilia R551-3: Smal_0750
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Entry
Smal_0750 CDS
T00733
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Smal_0750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smt03021
]
Smal_0750
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_0750
Enzymes [BR:
smt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Smal_0750
Transcription machinery [BR:
smt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Smal_0750
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Smal_0750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ACF50455
UniProt:
B4SKV7
LinkDB
All DBs
Position
877021..881244
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQYLQARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIASTGSETKLKRLTKRIKLIEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELSAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRSLENKKGEGMAFANIAEVKRAYDNR
VVELHARVKVRITEVVTDEDGIKQNKTSIVDTTIGRALLAEILPEGLPFALANTELTKKN
ISRLINSSYRQLGLKDTVVFADKLMYTGFAYATRAGVSIGIDDMLIPDEKKGILTEAEAE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVVNAKGETIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEVDCGTTEGLIMTPIVEGGDVVEPLKDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEAWVAKLEDAGVQTIKVRSTISCESAFGVCGRCY
GRDLARGHIVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSVK
FSNLKSVEHANGSLVAVSRSGEISVLDAHGRERERYKLPYGSMIASKDGDAVKAGQTVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDELTGLASREITDPKRRGAQAKDLRPIVR
IVDAKGNDLTIPGTDLPAQYLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAVLAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQVIVFE
GEHVTKGETIVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGSSKFLNGEQVERQRVIEENARLGARNELIARFDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTKDNLRGLKENVIVGRLIPAGTGLSYHSNRRRGASGLTESE
MQTLSGTPAVVEAPAVEAETEQASGEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgctggcttcgccggacctgatccgttcgtggtccttcggcgaagtgaagaag
ccggaaaccatcaactaccgtaccttcaagccggaacgtgacggcctgttctgcgccgcc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgtggtgtcgtgtgcgagaagtgcggcaccgaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcttcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcgtatgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagaacagtacctgcaggcccgccaggagcacggtgacgacttcgacgccgccatg
ggcgccgaggccgtgtacgagctgctgcgcaccatcgacctgcagtcggaaatgacccgc
ctgcgcgaagagatcgccagcaccggttcggaaaccaagctcaagcgcctcaccaagcgc
atcaagctgatcgaagccttcctggaatcgggcaaccgtccggagtggatggtcatgacc
gtgctgccggtgctgccgccggacctgcgtccgctggtgccgctggatggcggccgcttc
gcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgc
cgcctgctcgaactgagcgcgccggacatcatcgtgcgcaatgaaaagcgcatgctgcag
gaatcggtcgatgcgctgctggacaacggccgtcgcggccgtgccatcaccggcaccaac
aagcgcccgctgaagtcgctggccgacatgatcaagggcaagcagggtcgtttccgccag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggtccgtac
ctgcgcctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaagccgttc
gtgttcgccaagctgcagcgtcgtggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcatcca
gtgatgctgaaccgtgcgccgaccctgcaccgtctgggcatccaggcgttcgagccggtg
ctgatcgaaggcaaggccatccagctgcacccgctggtctgcaccgcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgtgccgctctcgctggaagcccagctggaagcg
cgtgcgctgatgatgtcgaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtcgtgctgggtctgtactacatgacccgctcgctggaaaacaag
aagggcgagggcatggccttcgccaacatcgccgaagtcaagcgcgcctacgacaaccgc
gtggtggaactgcacgcacgcgtcaaggtccgcatcaccgaggtggtgaccgacgaagac
ggcatcaagcagaacaagacctcgatcgtggacaccacgatcggtcgcgccctgctggct
gaaatcctgccggaaggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgccagctgggtctgaaggacacggtcgtgttc
gccgacaagctgatgtacaccggcttcgcctacgcgacccgcgccggcgtctcgatcggc
atcgacgacatgctgatcccggacgagaagaagggcatcctcaccgaggccgaagccgaa
gtgctggaaatccaggagcagtaccagtcgggcctggtcaccgccggcgagcgctacaac
aaggtggtcgacatctggtcgcgcaccaatgagcgcatcgccaaggcgatgatggacacc
atcggtaccgagaaggtcgtcaatgccaagggtgagaccatcgaccagaagtcgatgaac
tcgctgtacatcatggccgactccggtgcccgtggtagccaggcgcagatccgtcagctg
gccggtatgcgcggcctgatggcgcgtccggatggctcgatcatcgagacgcccatcaag
gcgaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggtgcccgt
aagggtttggccgataccgcgctgaagaccgcgaactcgggttacctgacccgtcgtctg
gtcgacgtggcgcaggacgtggtgatcaccgaggtggattgcggtaccaccgaaggcctg
atcatgaccccgatcgttgaaggcggcgacgtggtcgagccgttgaaggatcgcgtgctg
ggtcgcgtggttgccgaggacgtgttcctgccgggcaacgacgaagatccgatcgtcacc
cgcaacaccctgctcgacgaagcctgggtggccaagctggaagatgccggcgtgcagacc
atcaaggtccgctcgaccatctcctgcgaatcggccttcggcgtctgcggtcgctgctac
ggccgcgatctggcccgtggccacatcgttaacatcggtgaagcggtcggcgtcatcgcc
gcgcagtccatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggt
gcggcgtcgcgtgcggctgcggtcgacaacatcaccgtcaagaccaccggctcggtcaag
ttcagcaacctcaagtcggtcgagcatgccaatggctcgctggtggcagtgtcgcgttcg
ggcgaaatctcggtgctcgatgctcacggccgtgagcgtgagcgctacaagctgccgtac
ggctcgatgatcgcctccaaggatggcgatgcagtgaaggctggccagaccgtggccaac
tgggatccgcataaccacccgatcgtttcggaagtggccggtttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgagctgaccggcctggcctcgcgc
gagatcaccgacccgaagcgccgcggcgcccaggccaaggatctgcgcccgatcgtccgc
atcgtcgacgccaagggcaacgacctgaccatcccgggtaccgatctgccggcgcagtac
ctgctgccgccgcgttcgatcgtcaacctgcaggacggcgccgctgtcggcgtgggcgac
gtggtcgccaagatcccgcaggaagcgtccaagacccgcgacatcaccggtggtctgccg
cgcgtggccgatctgttcgaagcgcgcaagccgaaggatccggcagtgctggccgagcgt
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
accgatggttcggaacacgaagagctgattccgaagtaccgccaggtgatcgtgttcgaa
ggtgaacacgtgaccaagggcgaaaccatcgtggacggcgagccgagcccgcaggacatc
ctgcgcctgctgggtgtcgagccgctggctgcctacctggtcaaggaaatccaggacgtg
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcacccgccagatg
ctgcgcaaggtcgagatcaccgatcagggcagcagcaagttcctgaacggcgaacaggtc
gaacgccagcgcgttatcgaggagaatgcacgcctcggtgcccgcaacgagctgatcgcc
cgcttcgatccggtgctgctgggtatcaccaaggcctcgctggcgaccgagtcgttcatc
tcggcggcctccttccaggagaccacccgcgtgctgaccgaagctgccgtccgcggcacc
aaggacaacctgcgcggcctgaaggaaaacgtgatcgtcggccgcctgatcccggccggt
accggtctgtcgtaccacagcaatcgccgtcgcggcgcttccggtctcaccgagtcggaa
atgcagaccctgtccggtaccccggccgtggtcgaggcgccggctgtcgaagccgagact
gaacaggcttcgggcgaagaatga
DBGET
integrated database retrieval system
