Stenotrophomonas maltophilia R551-3: Smal_0780
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Entry
Smal_0780 CDS
T00733
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Smal_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smt03021
]
Smal_0780
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_0780
Enzymes [BR:
smt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Smal_0780
Transcription machinery [BR:
smt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Smal_0780
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Smal_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACF50485
UniProt:
B4SLH5
LinkDB
All DBs
Position
898984..899982
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDTRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDSATLSLSKQGPGVVTAADIKVDHN
VEILNGDHVICHLTKDTAVNMRLKIERGFGYQPAAARRRPDEETRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVASHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgtcctcgcggtccgcagatcgaacgccttacc
gacacccgtgcaaaggtcgttatcgaacctttggagcggggttacgggcatacgctgggt
aatgccctgcgtcgcgtgctgctgtcgtccatcccgggcttcgccatcacggaagtcgaa
atcgacggcgtgttgcatgagtacaccacggtcgaaggtctgcaggaggacgtgctggaa
gtcctgctgaacctgaaggacgtggccatccgtatgcactccggcgacagcgccaccctg
tccctgtccaagcagggcccgggcgttgtcaccgctgccgatatcaaggtcgaccacaat
gtggagatcctgaacggcgaccatgtcatctgccacctgaccaaggacacggcagtcaac
atgcgtctgaagatcgaacgtggtttcggctaccagccggctgccgcgcgtcgtcgtccg
gacgaagaaacccgtgccatcggccgtctggtcctggatgcctcgttctcgccggtccgc
cgcgtcgcctatgccgtggaagcggcccgcgtcgagcagcgtaccgacctggacaagctg
gtcatcgatatcgagaccaacggcaccatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggtgacttcacccaccgcgaccgcggtgcg
gccaagccggccaacaacggcgtggatccggtgctgctgcgcccgatcgacgatctggag
ctgaccgtgcgttcggcgaactgcctgaaggccgaaagcatctactacatcggcgatctg
atccagaagaccgaagtggagctgctgaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctggcccagcgtggcctgtcactcggcatgaagctggagaactgg
ccgccggccggcgtcgccagccacggcatgctgggctga
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