Stenotrophomonas maltophilia R551-3: Smal_0857
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Entry
Smal_0857 CDS
T00733
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03030
DNA replication
smt03430
Mismatch repair
smt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smal_0857
03430 Mismatch repair
Smal_0857
03440 Homologous recombination
Smal_0857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smt03032
]
Smal_0857
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_0857
Enzymes [BR:
smt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smal_0857
DNA replication proteins [BR:
smt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Smal_0857
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Smal_0857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_18
PIF1
AAA_30
AAA_7
AAA_19
AAA_2
Mg_chelatase
nSTAND3
TsaE
AAA_assoc_2
AAA_24
Se-cys_synth_N
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACF50562
UniProt:
B4SLQ2
LinkDB
All DBs
Position
1004691..1006736
Genome browser
AA seq
681 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKY
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEEIEADGSALVQLAKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVAAMLDALAEGDGPRLLQVVAALAEFSPDWSGVLEALAEGLHRIQVQQLVPG
AAAAAEGLDATVFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRMLAFRPAA
AVPSVPKTVESAAGGTPGGNTAGGGVGSQEASSAPAAAAASASPVAAAVPVQAAPREPEP
EPEPAPQPEPDPTPEPEPVPVQEPESPPPVKAAAEAPTPTPATDAAATDDLPPWATDEAE
ARDEALAAELAGPDAAMVAPWHEPPAPVPAPVEAKPAELERPFRAEGIAIAPAEPAAVRD
PAPQDGVSELASAEDWLDLVANSGLSGPSRQLAANAAFISCQRGTLKLGLSPGFEYLRSE
RALAALGEMLEKALGQAPKIVVETVETEHVPAETLHQRADRQRGERQQVAEAVFMDDPEV
QVLIQQHGARVVSDSIRSFDE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtccttgcccgcaagtggcgtccgaagcgttttgccgagctggtgggc
caggaacacgtggtccgtgcgctcagcaacgcgctggacagcggccgggtccaccatgcg
ttcctgttcaccggtacccgcggcgtgggcaagaccacgatcgcgcgcatcttcgccaag
tcgctcaactgcgagcagggcaccagcgcagacccatgcggccagtgcgcggcctgcctg
gacatcgacgccggccgctacatcgacctgctggaaatcgacgccgcgtccaacaccggc
gtggatgacgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgtggcaaatac
aaggtctacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagagccgccggagcacgtgaagttcctgctggccaccaccgacccgcag
aagctgccggtcaccgtgctcagccgctgcctgcagttcaacctcaagcgcctggacgag
gatcagatccagggccagatgacccgcattctggcggctgaggaaatcgaggccgacggc
agcgccctcgtgcagctggccaaggccgccgatggcagcctgcgcgacggcctgtcgctg
ctggaccaggcgattgcctatgccggcggcgcgctgcgcgaggatgtggtgcgcaccatg
ctgggcaccgtcgaccgtacccaggtggcggcaatgctcgacgcactggccgagggcgat
ggcccgcgcctgttgcaggtggtggccgcgctggccgagttctcgccggactggagtggc
gtgctggaagcattggccgaaggcctgcaccgcatccaggtgcagcagctggtgccgggc
gctgcggctgccgccgaaggcctggacgccacggtgttcgccgagcgcctgcgtccggag
gtggtccagctctggtaccagatggccttgaacggccgtcgtgacctgccgctggcgccg
agtccgcgcgccggcttcgaaatggccgtgctgcggatgctggcgttccgcccggccgcg
gcggtgccgtcggtgccgaagacagttgaaagtgcggccggcggtacaccgggtggcaac
acggccggtggtggcgttggcagccaggaggcatcgtccgcgcctgccgccgctgctgct
tcggccagtccggtcgccgccgcagtgcccgtgcaggccgcaccacgcgagcctgaaccc
gaacctgagccggccccgcaaccggagccggatccgacgccggaacccgagccggttcca
gtgcaggaacccgaatcgccgccgccggtgaaggccgccgcggaggctccaacgccgacg
ccggccacagatgcagcggcgaccgacgacctgccgccgtgggccaccgacgaagccgag
gcccgtgacgaggcgctggccgccgaactggcgggtccggatgcggcgatggtcgcgccc
tggcatgagccaccggccccggtgccagcaccggtcgaagcgaagcctgccgagctggag
cgcccgttccgtgccgagggcatcgccatcgcgccggccgagcccgctgcggtgcgtgat
cccgcgccgcaggacggtgtcagcgaactggccagcgccgaggactggctggacctggtc
gccaacagtggcctgagcggcccgtcgcggcagttggccgccaacgccgccttcatcagt
tgccagcgcgggaccttgaaactgggcctttcgcccggatttgaatacctgcgctcggag
cgcgcgctggctgcgctgggcgaaatgctggagaaggccctcggccaggcgccgaagatc
gtggtcgagaccgtggaaaccgaacacgttccggccgagaccctgcatcagcgtgccgat
cgccagcgtggcgaacggcagcaggtggcagaggctgttttcatggacgatccggaagtg
caggtgctgatccaacagcacggtgcccgggttgtttccgattccatccgttcttttgac
gagtaa
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