Stenotrophomonas maltophilia R551-3: Smal_1011
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Entry
Smal_1011 CDS
T00733
Name
(GenBank) diaminopimelate decarboxylase
KO
K12526
bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:
4.1.1.20
2.7.2.4
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt00260
Glycine, serine and threonine metabolism
smt00261
Monobactam biosynthesis
smt00270
Cysteine and methionine metabolism
smt00300
Lysine biosynthesis
smt00470
D-Amino acid metabolism
smt01100
Metabolic pathways
smt01110
Biosynthesis of secondary metabolites
smt01120
Microbial metabolism in diverse environments
smt01230
Biosynthesis of amino acids
Module
smt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
smt_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Smal_1011
00270 Cysteine and methionine metabolism
Smal_1011
00300 Lysine biosynthesis
Smal_1011
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Smal_1011
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
Smal_1011
Enzymes [BR:
smt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.4 aspartate kinase
Smal_1011
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Smal_1011
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
AA_kinase
Orn_DAP_Arg_deC
ACT_9
Ala_racemase_N
ACT
Motif
Other DBs
NCBI-ProteinID:
ACF50716
UniProt:
B4SN71
LinkDB
All DBs
Position
1148203..1150797
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AA seq
864 aa
AA seq
DB search
MSASPLVDRWIVLKFGGTSVSRRHRWDTIGKLAKKRAEETGSRVLVVVSALSGVTNELTA
IADGAPDSRDRVAALVERHQGFLQELELGAEVLAERLAVLQGLLDDPRAAARPLDWQAEV
LGQGELLSSSLGAAYLRASGLDFGWMDARQWLDALPPQPNQSDWSQRLSVNCQWRADAAW
AQRFRAQPTRLLITQGFISRHADGGTAILGRGGSDTSAAYFGALLGASRVEIWTDVPGMF
SANPKDVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERPELPGT
SIDGNAAPVPGVKAISRRNGIVLVSMEGIGMWQQVGFLADVFNLFKKHGLSVDLIGSAET
NVTVSLDPSENLVNTDVLAALSADLSQICKVKVIVPCAAITLVGLGMRSLLHKLSDVWAT
FGRERVHMISQSSNDLNLTFVIDEADADGLLPILHAELIDSGAMPVEETEVFGPRWREIA
GTVRPRGTPWWRGQRAHLLQLADAGTPRYVYHLPTVRARARALAAIKPIDQRYYAIKANS
HPAILQLLEAEGFGLECVSHGELKHVFQHLPELSPKRVLFTPSFCPREEYEAAFALGVTV
TVDNVEALQRWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAAT
ELGTRVVGLHAHLGSGVETAQHWRLMCDELAGFARRIGSVQTIDIGGGLPIPYSDEDEPF
DLDAWAEGLAEVKALHPAFRLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNT
LMRPALYDAWHDIENLSRQGGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIAD
AGAYGYVMSNTYNQRAMPREDVIE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttccccccttgtcgatcgttggatcgtactgaagttcggcggcacctcggtg
tcgcgtcgtcaccgctgggacacgatcgggaagctggcgaaaaaacgcgcggaagagacc
ggctcgcgcgtgctggtggtggtttcggcgctgtccggggtcaccaacgaactgaccgcg
attgccgatggcgcgccggacagccgtgatcgcgtggccgcgctggtcgagcgccaccag
ggcttcctgcaggaactggagctgggcgccgaggtgctggccgaacgactggccgtgctg
cagggcctgctcgatgacccgcgtgccgctgctcgtccgctggactggcaggctgaagta
ctgggccagggcgaactgctgtcctccagcctgggtgcggcctatctgcgtgccagcggc
ctggatttcggctggatggatgcccgccagtggctggatgcactgccgccacagccgaat
cagagcgactggtcgcagcgcctgtcggtgaattgccaatggcgtgccgatgccgcctgg
gcgcagcgcttccgcgcgcagccgacccggctgctgatcacccagggcttcatctcgcgc
cacgccgacggcggcaccgccatcctcggccgtggtggttcggatacctcggcggcgtac
ttcggtgcgctgctcggcgccagccgcgtggagatctggaccgacgtgccgggcatgttc
agcgccaatcccaaggacgttccggacgcgcggctgctgacccggctggactattacgaa
gcgcaggaaatcgccaccaccggtgccaaggtgctgcacccgcgttcgatcaagccgtgc
cgtgatgccggcgtgccgatggccattctcgataccgagcgcccggaactgccgggcacc
agcatcgacggcaatgccgcaccagtgccgggggtgaaggcgatcagccgccgcaacggc
atcgtgctggtgtcgatggaaggcatcggcatgtggcagcaggtcggcttcctggccgac
gtgttcaatctgttcaagaagcatggcctgtcggtggacctgattggttcggccgagacc
aacgtcaccgtatcgctggatccgtccgagaacctggtcaacaccgatgtgctggccgcg
ctgtcggccgatctgtcgcagatctgcaaggtgaaggtgatcgtgccgtgcgcggcgatc
accctggtcggcctcggcatgcgctcgctgctgcacaagctgtcggacgtgtgggcgacc
ttcggccgcgaacgcgtgcacatgatctcgcagtcgtccaacgacctgaacctgaccttc
gtcatcgacgaagccgatgccgatggcctgctgccgatcctgcacgccgagctgatcgac
agtggcgcgatgccggtggaagagaccgaagtgttcggcccgcgctggcgtgagattgcc
ggtacggtgcgcccgcgtggtacgccgtggtggcgtggccagcgtgcgcacctgctgcag
ctggccgatgccggtacgccgcgctacgtctaccatctgccgaccgtacgtgcccgtgcc
cgtgcgctggcggcaatcaagccgatcgaccagcgctactacgcgatcaaggccaacagc
catccggccatcctgcagctgctggaagccgagggctttggactggagtgcgtatcgcat
ggcgaactgaagcacgtgttccagcatctgccggaactgtcgcccaagcgcgtgctgttc
acccccagcttctgcccgcgcgaggaatacgaagcggcattcgcgctgggcgtgaccgtc
accgtcgacaatgtcgaagccctgcagcgctggccggacctgttccgcaaccgtgaactg
tggctgcgcgtcgatctgggtcgtggcgagggccaccacgccaaggtgcgtaccggcggc
aaggattccaagttcggcctgccgattgcccgcgtcgacgagttcgtgcgcgcggctacc
gaactgggcacccgcgtggtcggcctgcatgcgcacctgggcagcggcgtggaaaccgcg
cagcactggcgcctgatgtgcgatgagctggccggtttcgcccgccgcatcggcagcgtg
cagaccatcgacatcggtggtggccttccaattccgtacagcgacgaagacgagccgttc
gacctggatgcctgggccgagggcctggccgaggtcaaggcgctgcatccggcgttccgc
ctggcgatcgaaccgggccgcttcctggtggcggaatccggcgtgctgctgacccatgcc
acccaggtggtggagaaggatggcgtacgccgggtcggcctggatgcgggcatgaacacc
ctgatgcgcccggcgctgtacgacgcctggcatgacatcgagaacctcagccgccagggc
ggctacgccgaggccgccttcgatgtggtcggcccgatctgcgaatccagtgatgtgttc
ggcaagcgccgcaagctgccggtgtcgaccgcgccggacgatgtgatgctgattgccgat
gccggtgcctacggctacgtgatgtccaacacctacaaccagcgggcgatgccgcgcgaa
gacgtgatcgagtga
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