Stenotrophomonas maltophilia R551-3: Smal_1862
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Entry
Smal_1862 CDS
T00733
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt02020
Two-component system
smt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smal_1862
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Smal_1862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smt03021
]
Smal_1862
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smt02035
]
Smal_1862
Transcription machinery [BR:
smt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Smal_1862
Bacterial motility proteins [BR:
smt02035
]
Flagellar system
Flagellar assembly proteins
Stator
Smal_1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
ACF51566
UniProt:
B4SHY9
LinkDB
All DBs
Position
complement(2099459..2100202)
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AA seq
247 aa
AA seq
DB search
MKGAAQYREVQRSAANEVIAQHSDLVRRIAHHLAARLPASVEVDDLIQAGMMGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAATIRRLEQSSGRAASAT
EVAAAMEMPLPEYLRLMEDAARGQVLSLESRIEDQGELDTVTQGGPTPQQVLERGEFGRE
LGKAIGHLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVLRLRGRLKNFEA
ADAGLEE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcagcccagtacagggaagtgcagcgctcggcggcgaacgaagtcatcgcc
cagcattcggacctggtgcggcgcatcgcccaccacctggccgcgcgcctgccagccagc
gtcgaggtcgacgacctgatccaggccggaatgatgggcctgatcgaagcctcgcgcagc
tacgacgcggaccagggcgcctcgttcgagacctacgcgtcgatccgcatccgcggctcg
atgatcgacgagatccgccgtggcgactgggtgccccgctcggtgcaccgccgcgctcgt
gatgccgccgccaccatccgccgcctggagcagagcagcggccgcgccgccagtgccacc
gaagtggccgcggcgatggaaatgccgctgcccgaatacctgaggctgatggaagacgcc
gcacgtggccaggtgctgagcctggagtcgcgcatcgaagaccagggcgagctggacacg
gtcacccagggtggcccgaccccgcagcaggtgctggagcgcggcgagttcggccgcgag
ctgggcaaggcgatcggccacctgcccgagcgcgagcagctggtgctgtcgctctactac
gagcaggagctgaacctgaaggagatcggcgcggtgcttggcgtgagtgaatcgcgggtc
tgccagatccacggccaggcagtgctgcgcctgcgtggtcgactgaagaatttcgaggcg
gcggacgccggcctggaagaatga
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