Stenotrophomonas maltophilia R551-3: Smal_2315
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Entry
Smal_2315 CDS
T00733
Name
(GenBank) YadA domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
smt
Stenotrophomonas maltophilia R551-3
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smt02000
]
Smal_2315
Transporters [BR:
smt02000
]
Other transporters
Pores ion channels [TC:
1
]
Smal_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
ESPR
YadA_head
Motif
Other DBs
NCBI-ProteinID:
ACF52018
UniProt:
B4SLW5
LinkDB
All DBs
Position
complement(2600737..2605878)
Genome browser
AA seq
1713 aa
AA seq
DB search
MNRIYRRVWNRQLNALVVASELATGDSGGGAARDPRSVLLMPTVLALALLCALASGHAGA
SETNQSLRDLQALAAKYAQPMPVKVDAEVALAAASRQAQSSPAISADARVGLQLSTASLP
VVRDVLPASVQVNLAANTTPKQVAVPALAADVRANIGLGHAASNATKVDASLAAQVAPSA
HAPLGVAADARAKANVGVAGAQVASIDTGATAAAGISSTSAGSLPGLKTSVDGKVDSQLK
LAGHQINGQGQVKATAAVTLPAKEELPGETHDRAITAAFDTGVAGNVRLQAPDGQEVVAD
RNLKLAGQATVAAQNSALGVGGLVGGVVGSAGSAVGGALNGVVGTAGSAAGGALNGTVGS
VGGAVGGALNGTVDTVGSAVGGALNGTVGSVGGAVGGALNGAVGTVGAVGGAVGGALNGT
VGSVGGAVGGALNGTVGTVGSAVGGTLNGAVGTVGAVGGAVGGALNGTVGNVGSAVGGTL
NNTVGAVGSTVGGVLNGATGGSSGGLGGLLGNTLGNVGGAVGNLLNGNLNGTIGNLGSAV
GGLVGGTLSGLGLTKPSAIPPTSPKAPAPADPNAGLIIGTGGLVGNVGQLIGPTTTSLFG
GNGYLSNGNLKLSNANVMQTYSTVNVLGLPVVNLSPVGSTLNGLGGAVTGGSSHLTLIGG
VTSDSYIYNINNGNPGGLLGLLLPKDSPAWAAKCLDIALADISCWAVNAAQDYQVLMGDG
AFANGSKEVVIGANARHELPKVDANVAFPGAGTNDPSNPTGVPTADYAARMGHSVIVGDS
AVGTANGQTLLGAEATSNQANSVALGYRSAALRGAQASYSAYGLTAPQVSAGEVSVGTAG
GGERQITNVAAGSVNTDAVNVAQLKGAISLINGVADAAVTYDLDGAGNPNYRRVTLGAGT
GTTTIGNLAAGAVSAGSLEAVNGGQLATTNAAIAGFFGGRAAFDPASGAFTAPLFEISTI
STGGAIAKGLYENATDAFAAVDGSLVNLNTQITDIRNGGTKYLRVNSTGTEALASGTDSI
AVGTNARATAANSIAVGAGSLADRANSVSIGAAGAERQVTNLAAGTAATDAVNVGQLQAS
EQGALRYDLNGDGSVNYASATLGQTGTATTLRNLGPGQVSATSSEAINGAQLFAANQAVA
THLGGGAAVNASGVLTAPTYSINNVAANGTVTKGSYNDVGTAFDAVSNSLANVADQTDEI
DKLAVKYDVDGSGNVLNSVTLTGTGTGAVKITNVAAGSILAGSSDAITGDQLFSTNSTVA
NYFGGTTAYNGTTNVWTAPKFSISSIATDGTFTSGDYNNVTAAFTAVDGSLKVLNQRITN
NSGGSAYLAVNSTAAPATAAGAEAVAVGPQASAAGANSVAVGNGASASAGNSVALGAGSV
ASVGAQSGYTGAYGQTGASNSAGEVSVGSTGSERKITHVADGSDTYDATNVGQLKNGVNY
AIDESKKYTDQKIQNITNVAGSFRANNTNNLADPSASGANSAAGGAGSTAAGANSTALGN
GSQAQADNSVALGAGSVANRANTVSVGAAGAERQVVNVADGSQATDAVNVRQLQASQQGT
IRYDTTVNGATNYNSVTLGSTNSGPTTVRNVAAGTAGTDAVNVDQLKSGMAQTLDWSKAY
TDERMGGFERDLRKTDNRASAGIASAMATAALPQPSEAGRSMASVAAGSYNGESGVAVGI
SGVSEGGRWIYKFSGSTNSRGEAGVAVGAGIQW
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcatctaccggcgtgtatggaaccgccagctcaatgctctggttgtggcctcg
gaactggccaccggcgatagcggcggcggtgccgcgcgcgatccgcgcagtgtcctgctg
atgcccacggtgctggcgctggcactgctgtgtgcgctggccagcggccacgcaggagca
tcagaaaccaatcaatcgctgcgcgacctgcaggcattggccgccaagtatgcgcagccg
atgccggtgaaggtcgatgccgaagtggcattggccgccgcctcgcgccaggcgcagagc
agccctgcgatcagcgccgatgcacgtgtcggcctgcagctgagcactgcctcgctgccg
gtggtgcgcgatgtgttgccggccagcgtgcaggtgaatctggcggcgaacaccacgccg
aagcaggttgccgttccggcactggccgccgatgtccgcgccaacatcgggctgggtcat
gcagcgtccaatgcaacgaaggttgatgcatcgctggcggcacaggttgcgccgtccgcg
catgcaccgctcggcgtggctgcggatgcgcgggcgaaagccaacgttggcgtcgccggt
gcgcaggtggcctcgatcgataccggcgccacggcggcggccggcatcagcagtacctcg
gcgggttcgttgcctgggctgaagacctcggtcgatggcaaggtcgattcgcagctgaag
ctggctgggcaccagatcaatggccagggccaggtcaaagcgacggcagcggtcacgctt
ccggccaaggaagaactgccgggcgaaacccacgaccgtgcgatcactgcagctttcgat
accggcgtcgccggcaacgtgcgcctgcaggcgccggatgggcaggaagtggtggccgac
cgcaatctgaaactcgccggccaggcaacggtcgcggcacagaacagtgcgttgggtgtg
ggcggcctggtgggcggcgtggtgggctctgcgggtagtgcggtgggtggcgcgctcaac
ggtgtggtcggcacagctggcagcgcggcgggcggcgcactgaacggtaccgttggctcc
gtcggtggtgcagtcggcggtgcgctcaacggcaccgttgatactgttggcagtgcggtg
ggcggcgcactgaacggcacggttggatccgtcggtggtgcagttggcggtgcgctcaac
ggagcggtcggcaccgtcggtgcagtcggtggtgccgtgggtggcgcactgaacggcacc
gttggatccgtcggtggtgcagttggcggtgcgctcaacggcaccgtgggtactgttggc
agtgcggtgggcggcacgctcaacggagcggtcggcaccgtcggtgcagtcggtggtgcc
gtgggcggcgcactgaacggtactgtcggtaacgtcggcagcgcggtgggcggtacactc
aacaacacggttggcgcggtgggcagcaccgttggcggtgtgctcaacggcgcgaccggc
ggcagcagcggtggcctcggcggcctgctgggcaacacgctgggtaacgtcggcggtgcc
gtgggcaacctgctcaacggcaacctcaatggcaccatcggcaatctcggcagtgccgtg
ggtggcctggtcggtggcacgctgagcggcctcggcctgaccaagccctcggcgattccg
ccgaccagtccgaaggcgccggcaccggccgacccgaatgcgggtttgatcatcggcacc
ggcggcctggttggcaacgtcggccagctgatcggcccgaccaccaccagcctgtttggc
ggcaacggctacctgagcaacggcaacctcaagctcagcaacgccaacgtgatgcagacc
tactcgacggtcaatgtgctgggcctgcccgtggtcaacctgtcgccggtcggcagcact
ctcaacggcctgggtggcgccgtcaccggcggtagctcgcacctgaccctgatcggtggt
gtcacctccgacagctacatctacaacatcaacaacggcaatccgggcggcctgctcggg
ctgctgctgccgaaggattcgccggcgtgggcggccaagtgcctggacatcgccctggcc
gacatctcctgctgggccgtcaacgccgcgcaggactaccaggtgctgatgggtgacggc
gcctttgccaacggttcgaaggaagtggtgatcggcgccaatgcccgccacgagctgccg
aaggtcgatgccaacgtcgccttcccgggtgccggcaccaatgatccgagcaacccgacc
ggtgtcccgactgcggactatgccgcccgcatgggtcattcggtgatcgtcggcgacagc
gccgtcggtaccgccaatgggcagaccctgctcggtgccgaggcgacgtcgaaccaggcc
aactcggtcgccctgggctaccgctcggccgcgctgcgcggcgcccaggccagctacagc
gcctatggcctcactgcaccgcaggtctctgccggtgaagtgtcggtgggcaccgcaggc
ggcggcgaacgccagatcaccaacgtcgctgctggtagcgtcaacacggacgcggtcaac
gtggcgcagttgaagggcgcaatcagcctgatcaacggcgtggccgatgccgcagtgacc
tacgacctggatggcgccggcaatccgaactatcgccgggtaacgctcggtgcgggcacc
ggcaccaccaccatcggcaacctggccgctggtgcggtcagtgccggtagcctggaagcg
gtcaatggcggccagctggcgacgaccaacgccgccatcgccggcttcttcggtggtcgc
gcggccttcgatccggccagcggtgccttcactgcaccactgttcgagatcagcaccatc
tccaccggcggtgcgatcgccaagggtctgtatgagaacgccaccgatgccttcgccgcg
gtcgatggttcgctggtcaacctcaacacgcagatcaccgacatccgcaacggcggcacc
aagtacctgcgggtgaactcgaccggcaccgaagccctggccagtggcacggactcgatc
gccgtcggcaccaatgcccgcgccaccgccgccaacagcatcgcggtgggcgccggcagc
ctggccgaccgtgccaactcggtgtcgatcggtgcggccggagccgagcgtcaggtcacc
aacctggccgcgggtaccgcagcgaccgatgcggtcaacgtcggtcagctgcaggcgtcg
gaacagggggcactgcgctatgacctcaatggcgacggcagcgtcaactacgccagtgcc
acgctcggccagaccggcaccgccaccacgctgcgtaatctcggcccgggtcaggtcagt
gccaccagcagtgaggccatcaacggtgcccagctgtttgcggccaaccaggccgtggcc
actcatctcggtggtggcgcagcggtcaacgccagcggcgtgctgaccgcaccgacctac
tcgatcaacaacgtcgccgccaacggcaccgtgaccaagggcagctacaacgatgtcggc
accgccttcgacgcggtcagcaactcgctggccaacgtcgccgaccagaccgatgagatc
gacaagctggccgtgaagtacgacgtcgatggcagtggcaacgtgctcaacagcgtgacg
ctgacgggtaccggcaccggcgcggtgaagatcaccaacgtcgccgccggcagcatcctg
gccggcagcagtgatgccatcaccggcgaccagctgttcagcaccaacagcaccgtcgcc
aactacttcggtggcaccaccgcgtacaacggcaccaccaacgtgtggaccgcgccgaag
ttcagcatctccagcatcgccaccgacggcacctttaccagcggcgactacaacaatgtc
accgccgccttcactgcggtggacggctcgctgaaggtcctcaaccaacgcatcaccaac
aacagcggtggcagtgcctacctggcagtgaactcgaccgcagcgcctgcaacggctgcc
ggtgcggaagcggtggcggtcggcccgcaggccagtgcggccggtgccaacagcgtggcg
gtcggcaacggcgccagcgccagtgccggcaacagcgtcgccctgggtgccgggtcggtg
gccagcgtcggtgcgcagagcggctacaccggcgcctatggccagaccggcgccagcaac
tcggccggtgaggtttcggtcggcagcaccggcagcgagcgcaagatcacccatgtcgcc
gacggttccgatacgtacgacgcaaccaatgtcggccagctgaagaacggcgtgaactac
gccatcgacgaatcgaagaagtacaccgaccagaagatccagaacatcaccaacgtggcc
ggcagcttccgcgccaacaacaccaacaacctggccgatccgtccgccagcggtgccaac
tcggccgcaggtggcgcaggctccaccgccgccggtgccaactcgaccgcgctgggcaat
ggctcgcaggcgcaggccgacaactcggtggcgctgggtgcgggttcggtggcgaaccgg
gccaacacggtctcagtgggtgccgccggtgccgaacgccaggtggtcaacgtggccgac
ggttcgcaggcgaccgacgcggtcaacgtacgccagctgcaggcctcgcagcagggtacg
atccgttacgacaccacggtgaacggcgcgaccaactacaacagtgtcacgctgggcagc
accaacagcggcccgaccacggtgcgtaacgtcgccgccggcaccgccggtaccgacgca
gtcaacgtcgaccagctgaagtcgggcatggcgcagaccctggactggtcgaaggcctac
accgacgagcgcatgggtggcttcgagcgcgacctgcgcaagaccgacaaccgcgcctcg
gccggtatcgcctcggcaatggccaccgcagcactgccgcagcccagcgaagcgggccgc
agcatggcctcggtcgccgccggcagctacaacggcgagtcgggcgtggcggttggtatc
tccggtgtctccgaaggagggcgctggatctacaagttcagcggctccaccaacagccgt
ggcgaggccggtgtggccgtcggtgccggcatccagtggtga
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integrated database retrieval system
