Stenotrophomonas maltophilia R551-3: Smal_2578
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Entry
Smal_2578 CDS
T00733
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smt03032
]
Smal_2578
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_2578
Enzymes [BR:
smt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Smal_2578
DNA replication proteins [BR:
smt03032
]
Prokaryotic type
DNA Topoisomerases
Smal_2578
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Smal_2578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACF52278
UniProt:
B4SP83
LinkDB
All DBs
Position
complement(2874640..2877354)
Genome browser
AA seq
904 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMNELNAHSN
KPYFKSARIVGDVIGKYHPHGDQSVYDTLVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEARMSRLAHELMADIDKETVDFQPNYDEKELEPTVMPTRFPNLLVNGSAGIAVGMAT
NIPPHNLTESINACIALIDNPEIDVDGLMEYIPGPDFPTAGIINGTAGIIAGYRTGRGRV
RIRAKADIEVADNGRESIIVTEIPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLMNLKQMLEAFVRHRREV
VTRRTVFELRKARARAHVLEGLTVALANIDEMIELIKTSPNPAEARERMLARLWEPGLVG
SMLGAAGAEASRPDDLPKGVGLIEGGYQLTEIQATQILEMRLHRLTGLEQDRLTEEYKQL
LEVIAGLIHILEDPDRLLQVIREELISVKAEFGDERRTEIRHSEEDLDILDLIAPEDVVV
TVSHAGYVKRQPVSVYRAQRRGGRGRSAASTKEEDFIEQLWLVNTHDTLLTFTSSGKVFW
LPVYQLPEAGSNARGRPIINWIPLEPGERVQAVLPVREYADGQFVFFATKNGTVKKTPLG
EFAFRLARGKIAINLDEGDALVGVGLTDGERDILLFASNGKTVRFGEDKVRSMGRTATGV
RGIKMPAGEEVVSLIVAESAGGSEDENEDDNGVEETAANGDAVIDGADDASVQYILTATE
NGYGKRTPLPDYPRKGRGTQGVIGIQTTERNGKLVAAVLMGSGDEVLLISDGGTLVRTRG
SEISRVGRNTQGVTLIRLSKDEKLQAVERMDASIDEDEDEVAVAAPAATDGAPAAASSED
AAQE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgcgctgccagatgcgcgcgatggc
ctcaagccggtgcatcgtcgtgtgctgttcgcgatgaacgagttgaacgcgcacagcaac
aagccctacttcaagtcggcgcgtatcgtcggtgacgtcatcggtaagtaccacccgcat
ggcgatcagtcggtgtacgacacgctggtgcgcctggcgcagccgttctcgctgcgttac
atgctggtcgatggccagggtaacttcggttcggtcgacggcgattccgctgcggcgatg
cgatacaccgaggcgcgcatgtcgcgccttgcgcatgagctgatggcggacatcgacaag
gaaaccgtcgatttccagcccaactacgacgagaaggaactggagccgacggtcatgccg
acccggttcccgaacctgctggtcaacggttcggccggcatcgcggtgggcatggccacc
aacatcccgccgcacaacctgaccgagtcgatcaacgcctgcatcgcgctgatcgacaac
ccggaaatcgatgtcgacggcctgatggagtacatcccgggcccggacttcccgactgcc
ggcatcatcaatggcaccgccggcatcatcgccggctaccgcaccggccgtggccgcgtg
cgcatccgtgccaaagcggacatcgaagtggccgacaacggccgcgaatcgatcatcgtc
actgaaattccttaccaggtgaacaaggcgcgtctgatcgaaaagatcgccgagctggtc
aaggaaaagaagatcgaaggcatcagcgagctgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgagatcaagcgcggtgaatctgccgaggttgtgctgaacaacctgtac
cagcagacccagatggaatcggtgttcggcatcaacatggtggcgttggtcgatggccgc
ccgcagttgatgaacctcaagcagatgctggaggcgttcgtccgccaccgtcgcgaagtg
gtcacccgccgcaccgtgttcgagctgcgcaaggcgcgcgcccgtgcccacgtgctggaa
ggcctgaccgtcgcgctggccaacatcgacgagatgatcgaactgatcaagacctcgccg
aaccccgccgaagcccgtgagcgcatgctcgcgcgcctgtgggagccgggcctggtcggt
tcgatgctgggcgctgccggtgccgaagcctcgcgtccggatgacctgcccaagggtgtg
ggcctgatcgaaggcggctaccagctgaccgagatccaggccacccagatcctggaaatg
cgcctgcaccgcctgaccgggctggagcaggaccgcctgaccgaggaatacaagcagctg
ctggaagtgatcgccgggctgatccacatcctggaagatcccgatcgcctgctgcaggtg
atccgcgaagagctgatcagcgtcaaggccgagttcggcgacgagcgtcgtaccgaaatc
cgccacagcgaagaagacctggacatcctcgacctgatcgcgccggaagacgtggtggtc
accgtctcccacgccggctacgtcaagcgccagccggtgagcgtgtaccgcgcgcagcgc
cggggtggccgtggccgcagtgcagcgtccaccaaggaagaggatttcatcgaacagctg
tggctggtcaacacgcacgacacgctgctgaccttcaccagttcgggcaaggtgttctgg
ttgccggtctaccagctgcccgaagccggttcgaatgcccgcggccgtccgatcatcaac
tggattccgctggagccgggcgaacgcgtgcaggccgtactgccggtgcgtgagtacgct
gatggccagttcgtgttcttcgccacgaagaacggtacggtcaagaagaccccgctgggc
gagttcgccttccgtctggcgcgcggcaagatcgcgatcaacctcgacgagggcgatgcc
ctggtcggcgtcggcctgaccgacggcgagcgcgacatcctgctgttcgcctccaacggc
aagaccgtgcgcttcggtgaggacaaggtccgttcgatgggccgtaccgctaccggcgtg
cgcggcatcaagatgccggccggcgaggaagtggtcagcctgatcgtggccgaaagtgcc
ggtggcagcgaggacgagaacgaggacgacaacggtgtcgaggaaaccgcggccaatggc
gatgcggtgatcgacggcgccgatgacgccagcgtgcagtacatccttaccgccaccgaa
aacggctatggcaagcggaccccgctgccggactacccgcgcaagggccgcggcacgcag
ggcgtgatcggcatccagaccaccgagcgcaacggcaagctggtcgccgcggtgctgatg
ggctcgggcgacgaggtcctgctgatctccgatggtggcaccctggtgcgtacgcgtggc
tcggaaatcagccgcgtcggccgcaacacccagggcgtgaccctgatccgcctgtccaag
gacgagaagctgcaggcggtggagcgcatggatgcctcgatcgacgaggacgaggacgag
gtggctgtcgccgccccggccgcgaccgacggcgccccggctgctgccagcagcgaggac
gccgcacaggagtga
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