Stenotrophomonas maltophilia R551-3: Smal_3709
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Entry
Smal_3709 CDS
T00733
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smal_3709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smt03019
]
Smal_3709
Messenger RNA biogenesis [BR:
smt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Smal_3709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ACF53408
UniProt:
B4SLD9
LinkDB
All DBs
Position
complement(4179426..4180046)
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AA seq
206 aa
AA seq
DB search
MIDPDGYRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELQEETGL
LPEHVEVLGATPGWLRYKLPARAIRRNERQVCIGQKQVWFLLRLTGDESHVCLDHTDSPE
FDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQGVAGQGVTAMPKSAAEAWMPGHTA
GHDRPRKRPRSRGYWPKKAQGDVPPT
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggctatcgaccgaacgtcggcattgtgctgatgcggcaggacggc
caggtgttctgggcacgacgcgtgcgccgggacggttggcagttcccgcagggtggcatg
aataccgacgagacgcctgtcgaggccatgtatcgtgaactgcaggaagagaccggcctg
ctgcctgagcacgtggaagtgctcggggcaacgcccggctggctgcgctacaagctgccg
gcgcgggccatccgccgcaacgagcggcaggtctgcatcggccagaagcaggtctggttc
ctgctgcgcctgaccggtgacgaatcccatgtgtgcctggaccacaccgactcgccggag
ttcgaccactggcgatgggtggatttctggtacccggtggagcacgtggtgatgttcaag
cgcggcgtctacgcacgtgctttgcgacatctggctccgctggcccagggggtggccggg
cagggcgtcacggccatgcccaagagcgctgccgaggcctggatgcctggccacacggct
ggccacgatcgcccgcgaaagcgtccgcgcagccgcggctactggccgaagaaggcgcag
ggcgacgtcccgccgacgtaa
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