Stenotrophomonas maltophilia R551-3: Smal_3941
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Entry
Smal_3941 CDS
T00733
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03030
DNA replication
smt03410
Base excision repair
smt03420
Nucleotide excision repair
smt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smal_3941
03410 Base excision repair
Smal_3941
03420 Nucleotide excision repair
Smal_3941
03440 Homologous recombination
Smal_3941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smt03032
]
Smal_3941
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_3941
Enzymes [BR:
smt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smal_3941
DNA replication proteins [BR:
smt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Smal_3941
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Smal_3941
NER (nucleotide excision repair)
GGR (global genome repair) factors
Smal_3941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ACF53640
UniProt:
B4SNM0
LinkDB
All DBs
Position
complement(4436164..4438938)
Genome browser
AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYEQYKANRPPMPDELRSQVEPMCRIVEALGISILRIPGVEADDVIGTLALQGV
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMEKFGVRADQIIDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTDVELEASPTTLALREQDVPELTELYARYGFTQALKELGAPLPAPTAASEATPSLRGTA
AGFARGSAEAPAAGTLDPALAAPGEYETVLTAEQLQAWVERLQQADLISFDTETDALDAM
RARLVGISLAVEPGKAAYIPVGHDYPGAPPQLPMQQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVEVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYNTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADITLRLHRALQPQLLAEPALDSVYRDIEMPLVPVLTSIEANG
VRIDTVELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFIAPEGFQLLAADYSQIELRIMAHLSEDPGLV
GAFEQGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVDVDQWLRDSGAPARMILQVHDELVFETESSFVEELRLQVVERM
SQAAKLRVPLVVDTGIGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggcgaacccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgaccctgaaggagcgcccggcctacgtggcgttcgtggtcgatgcgcccggc
aagaccttccgcgatgacctgtacgagcagtacaaggccaaccgcccgccgatgccggac
gagctgcgcagccaggttgaaccgatgtgccgcatcgtcgaagcgctgggcatcagcatc
ctgcgcatccctggcgtggaggccgatgatgtgatcggcacgctggccctgcagggcgtg
gcgcaggacctgaaggtgaccatctccaccggcgacaaggactttgcccagctggtgcgc
ccgggcatcgaactggtcaacaccatgaccggcagccgcatggattccgatgcggcggtg
atggagaagttcggcgtgcgcgccgaccagatcatcgacctgctggcgctgatgggcgac
accgtcgacaacgtgccgggcgtggagaaatgtgggccgaagaccgccgccaagtggctg
gccgagtaccagcacctggatggggtgatggcggccgcgccgaccatgaagggcaagatc
ggcgaaaacctgcgcgccgcgctggagcgcctgccgctgaaccgcgagctggtgaccatc
cgcaccgacgtggagctggaggccagcccgaccacgctggccctgcgcgagcaggacgtg
ccggagctgaccgagctgtatgcgcgctatggcttcacccaggcgctgaaggagctgggt
gcaccgctgccggcgccgacggccgccagcgaagcaacgccgagcctgcgtggcaccgcc
gctggcttcgcccggggcagcgccgaggcaccggcagcgggcacgctggatccggccctg
gccgcgccgggtgaatacgagaccgtgctgaccgccgagcagctgcaggcctgggtcgag
cgcctgcagcaggcggacctgatcagtttcgataccgaaaccgatgcgctggacgcgatg
cgtgcgcgcctggtgggcatcagcctggcggtcgagccgggcaaggccgcctatattccg
gtcggccacgattacccgggcgcgccgccgcagctgccgatgcagcaggtgctggacgca
ctgcgcccggtgttgcaggacccggcgaagaagaagctgggccagcacggcaagtacgac
ctgcacgtactgcgccgccacggcgtggaggtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaattccaccgccacccgccacgacatggattcgctggccctgcgt
tacctgggctacaacaccatcaagttcgaggacgtggccggcaagggcgccaagcagatt
ccgttctcgcaggtgggcatcgacgaagccagccgctacgcggccgaggacgccgacatc
accctgcgcctgcaccgcgcgctgcaaccgcagctgctggccgagccggcgctggacagc
gtgtaccgcgacatcgagatgccgctggtgccggtgctcaccagcatcgaagccaatggc
gtgcggatcgataccgtcgagctgcgccggcagagccaggacctgtcctcgcgcatgctg
gccgcgcagcagaaggccaccgagctggccggccgcagcttcaacctggattcgcccaag
cagctgcaggcggtgctgttcgatgagctgaagctgccggcggtggtgaagaccccgaag
ggccagcccagcaccaacgaagaggcactggaggcgattgccgaccagcacgagctgccg
cgggtgatcctggagtaccgcggcctggccaagctgcgcagcacctataccgacaagctg
ccggagatggtcaatccggacaccggccgcgtgcataccagctaccaccagtccggcgcc
gccaccggccgcctgtcctcgtcggaccccaacctgcagaacatcccgatccgcaccgag
gatggccgccgtatccgacgcgcattcatcgccccggagggcttccagctgctggcggcc
gactattcgcagatcgagctgcggatcatggcccatctgtcggaagatccgggcctggtg
ggcgccttcgagcagggcgccgacgtccaccgcgccaccgccgccgaggtgttcgggcgc
acgctggaagaggtgactccgaacgagcgccgcgcggccaaggcgatcaacttcggcctg
atgtacggcatgagcgccttcggcctggcccgcaacctgggcatcgaccgtggccaggcg
caggactacgtggcgctgtacttcagccgctacccgggcgtgcgtgatttcatggagcgg
atgcgccagcaggcccgcgaccagggctatgtggaaaccctgttcggccgccgcctgtac
ctgaacgacattcatgcacgtaaccagggcctgcgcgccggtgccgagcgcgccgcgatc
aacgcgccgatgcagggcaccgccgccgacatcatcaagcgtgcgatggtggacgtggac
cagtggctgcgtgacagcggcgcgccggcacggatgatcctgcaggtgcacgatgaactg
gtgttcgaaaccgaaagcagtttcgtcgaggagttgcgtttgcaggtggtcgagcgcatg
tcgcaagcggccaaactgcgggtgccgctggtggtcgataccggcatcggcaacaactgg
gacgaagcacactga
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