Stenotrophomonas maltophilia R551-3: Smal_3947
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Entry
Smal_3947 CDS
T00733
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03420
Nucleotide excision repair
smt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Smal_3947
03430 Mismatch repair
Smal_3947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_3947
Enzymes [BR:
smt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Smal_3947
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Smal_3947
MMR (mismatch excision repair)
Other MMR factors
Smal_3947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACF53646
LinkDB
All DBs
Position
complement(4441475..4443667)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKELWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTLHMTLAE
RVDHVLARSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPLKLGALVTHPKFGEGMVTDYEGNGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcacagctgcccaat
ggcagccgcggcatgtggatcggcaccttccatggcctggccaaccgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtcatggattcggacgaccagctg
cgactggtcaagcgcgtggtgcaggcgctggaactggatgacggcaagtacccggccaag
cagatcgcgtggtggatcaacgcgcagaaggacgagggccgccgcccacagcacatccag
cccgaaccgcacgacgcgtggctggaaaccatgcgccaggcctacatcgagtaccaggca
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcatgagctg
ctgcgcgacaacccggcgttgctgtcgcactaccgcgcgcgcttccgcgagatcctggta
gacgagttccaggacaccaatgccatccagtacgccttcgtgcgcgtgctggccggcgat
tccggccacgtgttcgtggtcggtgacgatgaccaggccatctacggctggcgcggtgcc
aaggtcgagaacgtgcagggcttcctgcgcgacttcccgggcgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggtgccgccaacgcggtgatcgcgcac
aacccggatcgcatcggcaaggaactgtggaccgacagcggcgacggcgagccgatcgac
ctgtatgccgcctacaacgagatggacgaagcgcgctacatcgtcgagcgtgcccgccag
tgggtgcgcgacggtggcagctacaccgaagtggccgtgctctaccgcagcaacgcgcag
tcgcgcgcgctggaagaagcactgctgagcgagcaggtgccgtaccgcgtgtatggcggc
atgcgcttcttcgaacgtgccgaaatcaaggacgcgctggcctacctgcgcctgctgtcc
aaccgcaacgatgacgcggcgttcgagcgcgcggtcaacacgccgacgcgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaagcgcgcgcgcagggtatttcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgcacgtgcgcgcaatgcgctggcc
ggcttcctggtgctggtcaacgagctgcaggcgcagactctgcacatgaccctggccgag
cgcgtggaccacgtgctggcgcgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctcgattcggaatcgcgcaccgacaacctcgacgaactggtctcggtggcctct
cgcttcgtgcgccgcgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcattcctggcctatgccgcgctggaggccggcgagggccaggcgcaggcgggcgaggaa
ggcgtgcagctgatgaccctgcactcggccaagggcctggaattcccgctggtgttcctg
gccggcctggaagaaggcttgttccccagcgcacgttcgctggaggaaagcgggcggctg
gaagaagagcgccgcctggcctacgtgggcatcacccgcgcacgccagaaactggtgctg
agctacgccgaatcgcgccgcatccatggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagattccgcgcgagctgctgcacgaagtgcgcccgaaggtgcaggtctcgcgg
ccggcctcgatgggcgccagccgggtgatgggccatgcctcgatcgaggcaccgccgctg
aagctcggcgcactggtcacccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggtgcccacgcccgcgtgcaggtcgagttcgccgatgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga
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