Stenotrophomonas maltophilia R551-3: Smal_4013
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Entry
Smal_4013 CDS
T00733
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
smt
Stenotrophomonas maltophilia R551-3
Pathway
smt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Smal_4013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smt03400
]
Smal_4013
Enzymes [BR:
smt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Smal_4013
DNA repair and recombination proteins [BR:
smt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Smal_4013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
RecD_N
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SH3_13
AAA_16
UvrD_C
T2SSE
SLFN-g3_helicase
AAA_28
nSTAND3
Herpes_Helicase
AAA_25
TraI_hel_assoc_N
AAA_29
DEAD
NTPase_1
ATPase
AAA_17
SRP54
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACF53712
UniProt:
B4SNU2
LinkDB
All DBs
Position
complement(4535576..4537456)
Genome browser
AA seq
626 aa
AA seq
DB search
MSLLKELHQKGLLRTLDHALATSLQRLRDDTPESVALAAALASLAVSQGHAAFDPAQPQR
LLEGVPEWPAAQDWLEQLCASPWVATPEQADAIAEDAPLVLENGLLYLRRYREYERQLAA
GLQRIGRHPLPAPDMAALAPLFAQLFPQALGGEDHQARAAGVTLRHPLALVTGGPGTGKT
TTIARLLLLLAAQARHAGQPLPEVALAAPTGRAAERMAESLRVAVQRLQEQGLDPALCAA
LPSTGTTLHRLLGVIPDSPRFRHHADNPLPVDVVVVDEASMIDLPMMAKLVDAIASGTRL
ILLGDPDQLPSVEAGDVLSAILRASGDGIGTRADDAQALHGLLAPAILQPQAAPRAFAGR
RVQLQRGYRQSDALDLAPLAHAVREGDSSTALQLLRSGELAGVHFHEGEADPLRGQREHL
LGHWRALADAADPVLALQQAGRLRVLTALREGPQGARGLNSRIEQLLAGNTPGYFQGRLL
LVTENSYRHRLFNGDIGICLRDGSGAMVAWFPGDSVDQPRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRQDSRVLSRELVYTGLTRARQVLHVAGSADVLQAALKRHASRLGGL
AWRLGAEEVAEAPARIEQPTVQGQLF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgaaggaactgcaccagaagggcctgctgcgcaccctcgaccatgcacta
gcgaccagcctgcagcggctgcgcgacgacacgcccgagagcgtggcgctggcggctgcg
cttgcgtcgctggcggtatcgcaaggccatgctgcgttcgatccggcgcaaccgcagcgg
ttgctggaaggcgtacccgagtggcctgccgcgcaggactggctggagcagctgtgcgca
tcgccgtgggtcgcgacgccggagcaggccgacgccatcgccgaggatgcgccgctggtg
ttggagaacggcctgctctacctgcgccgctatcgcgagtacgagcgtcagctggcggct
gggctgcagcgcatcggccggcatccgctgccggcgccggacatggcagcgttggcgcct
ttgttcgcgcagctgttcccgcaggcactgggcggcgaagatcatcaggcacgcgccgcc
ggcgtgaccctgcgccatccgctggcgctggtcaccggcggccccggcaccggcaagacc
accaccatcgcgcgcctgttgctgctgctggccgcgcaggcccggcacgccggccagccg
ctgcccgaggtggcgctggccgcgcccaccgggcgtgccgccgagcgcatggccgagagc
cttcgcgtcgccgtgcaacggctgcaggaacaaggactggacccggcgttgtgcgcggcg
ctgcccagtaccggcaccaccctgcatcgcctgctcggcgtgattcccgattcaccgcgc
ttccgccaccatgccgacaatccgctgccggtggatgtggtggtggtcgacgaagcctcg
atgatcgatctgccgatgatggccaagctggtcgacgcgatcgccagcggcacccggttg
atcctgctcggcgatcccgatcagttgccctcggtcgaggccggcgacgtgctcagcgcg
atcctgcgtgccagcggtgatggcatcggtacccgcgctgatgacgcgcaggcactgcat
ggtcttctggcgccggccatcttgcagccgcaggccgcaccacgcgccttcgccgggcgc
cgcgtgcagctgcagcgcggctaccggcagagcgatgcgctggatctggcaccgctggcc
cacgccgtgcgcgagggcgacagcagcacagcattgcagctgctgcgcagcggtgaactg
gccggcgtgcatttccacgaaggcgaggccgatccgctgcgtggccagcgcgagcacctg
ctgggccactggcgagcactggccgacgcggctgatccagtgcttgccctgcagcaggcc
gggcgcctgcgtgtgctgaccgccttgcgcgaaggcccgcagggcgcacgcgggctcaac
agccgcatcgaacagctgctggccggcaacacccccggctacttccagggtcgcctgctg
ctggtcaccgagaacagctaccggcatcgcctgttcaacggcgatatcggcatctgcctg
cgtgatggcagcggcgcgatggtggcctggttccccggcgacagcgtcgaccagccgcgc
gccttccacccggccgcactgcccgcgcatgaaagcgccttcgcgatgaccgtgcacaag
gcgcagggttcggagttcgacgaagtgtggttgcagctcccacgccaggacagccgcgtg
ctgtcgcgcgaactggtctacaccggcctgacccgcgcccgccaggtgctgcatgtggcc
ggcagcgccgatgtgctgcaggccgcattgaagcgccacgccagccgattgggtggtctg
gcctggcggctgggtgcggaagaggtggctgaagcaccggcgcgcatcgaacagcccacc
gtgcagggccagctgttctga
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