Streptococcus mutans UA159 (serotype c): SMU_1002
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Entry
SMU_1002 CDS
T00100
Symbol
topA
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smu
Streptococcus mutans UA159 (serotype c)
Brite
KEGG Orthology (KO) [BR:
smu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smu03032
]
SMU_1002 (topA)
03400 DNA repair and recombination proteins [BR:
smu03400
]
SMU_1002 (topA)
Enzymes [BR:
smu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SMU_1002 (topA)
DNA replication proteins [BR:
smu03032
]
Prokaryotic type
DNA Topoisomerases
SMU_1002 (topA)
DNA repair and recombination proteins [BR:
smu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMU_1002 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
AAN58703
UniProt:
Q8DUD3
Structure
PDB
PDBj
LinkDB
All DBs
Position
946849..948966
Genome browser
AA seq
705 aa
AA seq
DB search
MTSKTTTTVKKTSKKRATPKKNLVIVESPAKAKTIEKYLGRSYKVVASVGHIRDLKKSSM
SIDFDNNYEPQYINIRGKGPLINSLKKEAKNAKQIFLASDPDREGEAISWHLAHILDLDL
KGKNRVVFNEITKDAVKNAFVEPRQIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGL
SAGRVQSVALKLIIDRENEIKAFKPEEYWSIDGFFKKGNKKFQANFYGLDNKKTKLKSND
DVKKVLTRIKNDDFLVDKVEKKERKRNAPLPYTTSSLQQDAANKINFRTRKTMMVAQQLY
EGIRLGSNGQQGLITYMRTDSTRISPVAQNDAANYITEHFGAEYSKHGNHVRNASGAQDA
HEAIRPSNVNHTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTVKVNLTQNGVLFI
ANGSQIKFKGYMAVYNDSDKTKVLPEMIKGETVKKISANPEQHFTQPPARYSEASLIKTL
EENGVGRPSTYAPTLETIQKRYYVRLVSKRFEPTELGEIVNSLIIEFFPDIVDVKFTAEM
ESKLDEVEIGKEEWQKVIDQFYKPFEKEVIKAEEQMEKIQIKDEPAGFDCDVCGHPMVIK
LGRYGKFYACSNFPDCHNTKAITKEIGVICPICQKGQVIERKTKRNRIFYGCDRYPDCDF
TSWNKPIGRDCPKSGDFLVEKKIRGGGKQVVCSNEECDYKEKAVK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgacaagtaaaacaacgacaacagtaaaaaagacgagtaaaaagcgagcgactcctaag
aaaaatttagtcattgtcgagtcacctgctaaggcgaaaaccattgagaaatatctagga
cgttcatataaagtggtggcttctgtagggcatattcgtgacttaaaaaagtcaagcatg
tccattgattttgataataattatgagccgcaatatattaatattcgcggcaagggtccc
ttaatcaattctctaaaaaaagaagctaagaatgccaagcaaatctttttagcaagtgac
ccggatcgtgaaggggaagcgatttcttggcatttagctcatattttggatttagatctt
aaaggtaaaaaccgtgttgtctttaatgaaatcactaaagatgctgtcaaaaatgccttt
gtcgagccgcgtcaaattgacatggatcttgttgatgcccaacaagcccgtcgtgttttg
gatagaattgttggttattctatttctcctattctttggaaaaaagttaagaaaggtctt
tcagctggtcgtgtacagtctgttgctcttaaacttattattgaccgcgaaaatgaaatc
aaagcttttaaaccagaggagtattggagtattgatggtttctttaaaaaaggaaataag
aaattccaagctaatttttatggacttgataacaaaaaaactaagctgaaaagcaatgat
gatgttaagaaagtattgactcgcattaagaatgatgactttcttgttgacaaagtagaa
aagaaagaacgaaaacgtaatgcaccgcttccttatacgacatcttccttgcaacaagat
gccgccaataagattaatttcagaacacgaaaaaccatgatggttgctcagcagctttat
gaaggaataagacttggctctaatggccagcaaggtctaattacctatatgcgtacagat
tcaactagaatcagccctgtggctcaaaatgatgctgctaattatattactgaacatttt
ggtgctgaatattctaaacacggaaatcatgttcgcaatgcctccggtgctcaagatgcc
catgaagcgattcgtccatctaatgttaatcatacacctgaatccattgctaaatatctt
gataaagatcaattaaaactttatactctcatttggaatcgttttgttgctagtcagatg
accgccgcagtttttgatactgttaaggttaatttgacgcaaaacggtgtcttatttatc
gctaacggcagtcagattaagttcaagggctatatggctgtttacaacgattctgataag
accaaagtacttcctgaaatgatcaagggagaaacagttaaaaagatttcagctaatcct
gagcagcatttcacgcaaccacctgctcgttattcagaagcaagtcttattaagactttg
gaagaaaatggtgttggtcgtccatcaacctatgcaccgactcttgagacgatccaaaag
cgttactatgtacgtttagtatctaagcgttttgagcctacagaacttggtgaaattgtt
aattctttaattatagaatttttccccgacattgttgatgtgaaattcactgctgaaatg
gaaagtaaactggacgaagttgagattggcaaagaggagtggcagaaggttattgaccaa
ttttataaaccatttgaaaaagaggttattaaagcagaggaacagatggaaaaaatccaa
attaaggatgaacctgccggttttgactgtgatgtttgtgggcatccaatggttattaaa
ttaggtcgctatggtaaattttacgcttgcagtaattttccagattgccataataccaaa
gctattactaaagaaattggagtgatatgtccgatttgtcaaaaaggtcaagtcattgag
cgaaaaacaaagcgtaatcgtattttctatggctgtgatcgctatcctgattgtgatttt
acttcatggaataaacctataggccgcgattgtccaaaatctggagattttctcgttgag
aaaaaaatccgtggcggcggcaaacaagttgtttgtagcaatgaggagtgtgactataag
gaaaaagctgttaaataa
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