Streptococcus mutans UA159-FR: SMUFR_0101
Help
Entry
SMUFR_0101 CDS
T03797
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
smua
Streptococcus mutans UA159-FR
Pathway
smua03030
DNA replication
smua03430
Mismatch repair
smua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMUFR_0101 (polC)
03430 Mismatch repair
SMUFR_0101 (polC)
03440 Homologous recombination
SMUFR_0101 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smua03032
]
SMUFR_0101 (polC)
03400 DNA repair and recombination proteins [BR:
smua03400
]
SMUFR_0101 (polC)
Enzymes [BR:
smua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMUFR_0101 (polC)
DNA replication proteins [BR:
smua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMUFR_0101 (polC)
DNA repair and recombination proteins [BR:
smua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMUFR_0101 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
Rv2179c-like
DEDDh_C
Ofd1_CTDD
Motif
Other DBs
NCBI-ProteinID:
AJD54577
LinkDB
All DBs
Position
122774..127186
Genome browser
AA seq
1470 aa
AA seq
DB search
MRGNDMSELFKKLMDQIEMPLEMKNSRVFSSADIVEVKVYPESRIWDFRFSFETILPIDF
YQELRSRLVTSFETADIKAVFDIEVENAEFSNELLQAYYQEAFKQPTCNSASFKSSFSHL
TVSYTDGKVLISAPQFVNNDHFRKNHLPNLEKQFEAFGFGKLSFDIVSNQKMTEEIKHHF
ESSRQQQIQKASQETLEIQKSLEASIPPEEIPKPVSNFKERIKDRQAAFEKAEITPMAEI
ETEENRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKG
AWLRVRGNIENNPFTKALTMNVQNVKTIVHKERKDLMPQGEKRVEFHAHTNMSTMDALPT
VEQLVAKAAQFGHPAVAITDHGNVQSFPHGYHAGKKNGIKVLFGLEANLVEDRVPIVYNE
VDMDMNEATYVVFDVETTGLSAINNDLIQIAASKMHKGNIVEQFDEFIDPGHPLSQFTTD
LTGITDQHVKGAKPISQVLQEFQSFCQDTVLVAHNATFDVGFMNANYERHDLPKITQPVI
DTLEFARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAKEKHGVN
NLLDLNTKIVDDNSYKKARVKHATIYVLNQKGLKNLFKLVSLSNVTYFAGVARIPRTILD
QYRDGLLLGTACSDGEVFDTVLSKGVEDAVEVAKYYDFIEVMPPALYEPLLARELIKDEA
GIQQIIKDLIEVGRRLDKPVLATGDVHYLEPEDEIYREIIVRSLGQGAMINRPIGRGENA
QPAPLPKAHFRTTNEMLDEFAFLGEDLARDIVIKNPNEMVERFEDVEVVKTDLYTPFIEN
SEEKVAEMTYEKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGY
LVGSRGSVGSSFVATMIGITEVNPMPPHYICPNPDCKHSEFITDGSVGSGYDLPDKICSE
CGTPYKKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEEYAFRAGTVG
TVADRTAYGFVKGYERDYGKFYRDAEVDRLAQGSAGVKRTTGQHPGGIVVIPNYMDVYDF
TPVQYPADDLTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPKTIPADD
PEVMKLFSGTEVLGVTEEEIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSH
GTDVWLGNAQDLIKQGIATLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGAWLKIS
EEERNGYISAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIYYYCA
YFSIRAKAFELKTMSAGLDAVKARMADISQKRKINQASNVEIDLFTTLEIVNEMLERGFK
FGQLDLYRSDATEFIIDGDTLIPPFVALEGLGENVAKQIVKARNEGEFLSKTELRKRGGL
SSTLVEKMSDMGILGSMPEDNQLSLFDDFF
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaaatgatatgtcggaattgtttaaaaaattgatggatcagattgagatgccg
cttgaaatgaagaattcaagggttttttcatctgctgatattgtggaagtgaaggtttat
cctgagagtcggatttgggatttccgtttttcttttgagaccatcttaccaattgatttt
tatcaggagttaagaagcagattagtgacgagttttgaaacagctgatattaaggctgtt
tttgacattgaagtggagaatgctgaattttctaacgagcttttgcaggcttattatcag
gaggcttttaagcagccgacttgcaatagtgctagttttaaaagctctttttcgcactta
actgtttcctatactgatgggaaagttcttatttcagcgccgcaatttgtcaataatgat
cattttcgaaagaatcatttacctaatcttgaaaagcagtttgaagcgtttgggtttggg
aaattaagttttgacattgtatctaatcaaaaaatgacagaggaaataaaacatcatttt
gaatcctctcgtcagcagcaaattcaaaaggctagtcaagaaacgctagaaattcaaaaa
tcattagaagcttcaataccgcctgaagaaattcctaaacccgtatccaatttcaaagag
cgaatcaaggatcggcaagcagcttttgaaaaggctgagattacgcctatggctgaaatt
gaaactgaggaaaaccgcatcacatttgaagggcttgtttttgatgtggaacgcaagaca
acaagaaccggacgtcatatcatcaattttaaaatgacggattatacctcaagttttccg
atgcaaaagtgggctaaggatgatgaagaattaaagaaatatgacatgatttctaagggt
gcttggttgcgcgtgcgtggcaatatcgagaataatccttttacaaaagccttaaccatg
aatgtccaaaatgtcaagaccattgttcataaagagcgtaaggacttaatgccccaaggg
gaaaaacgtgttgaatttcacgctcataccaatatgtcaaccatggatgctttgccaaca
gttgagcaattagtggccaaggcggctcagtttggtcatcctgcggttgctattacggat
catggcaatgttcagagtttccctcatggctatcatgcaggtaaaaagaatggcattaag
gttctctttggcttggaggctaatcttgttgaggaccgtgtacctattgtctacaatgaa
gttgatatggatatgaatgaagcgacctatgttgtttttgacgtggaaactacaggactt
tcagccatcaataatgatttgattcagattgcagcttctaagatgcataaaggaaatatt
gttgagcaatttgatgagtttattgatcccgggcatccgctcagtcagtttacaaccgat
ttaacagggatcacagatcagcatgtgaaaggggctaagcccatttcacaagtattgcag
gaatttcagtccttttgtcaagatacagttttagttgcccataacgccacttttgacgtt
ggctttatgaatgccaattatgaaaggcatgacctgccaaagattacgcagccagtcatt
gataccttggaatttgcacgaaatctttatccagaatacaagcgtcatggtttaggtcct
ttgactaaacgctttcaggtatcgcttgagcaccaccacatggctaattacgacgctgag
gcaactggtcgtctgctctttatctttcttaaagaggcgaaagaaaagcatggggtcaac
aatcttttagatcttaatactaaaattgttgatgataattcttacaagaaagctcgggta
aagcatgcaaccatttatgtcctgaatcaaaaagggttgaaaaatttatttaaattagtc
agtctatccaatgttacttattttgcaggtgtggctagaataccaagaacgattcttgat
cagtatcgtgatggcctcttactggggacagcctgctctgatggtgaagtttttgatacg
gttctctcaaaaggggttgaagatgctgtggaggtagccaagtattatgattttattgaa
gtcatgccacctgctctttatgaacctcttcttgctcgtgaattaatcaaagatgaagca
ggaattcagcaaattattaaagatcttattgaagttggtcgtcgtttagataagcctgtc
ttggcaactggtgatgtccattatctggaaccggaagacgaaatttatcgtgaaatcatt
gttagaagtctgggacagggagctatgattaatcgtcctattgggcgtggtgaaaatgct
cagccagctcctctgcccaaggctcattttagaacaaccaatgagatgttggatgaattt
gcttttttaggcgaagatttagcccgtgacattgtcattaaaaatccaaatgagatggtt
gagcgttttgaagatgttgaagttgttaaaacagacctctatacgccttttattgagaat
tctgaagaaaaagtcgctgagatgacttatgaaaaggcctttgaaatttatggcaatcct
cttccggatatcattgacttgcgtattgaaaaagagttgacttccattttggggaatgga
tttgcggtgatttatctggcttcacagatgctggtaaatcgttctaatgaacgtggttat
ctggttggttctagaggttcggttggttctagttttgtggcaaccatgattggtattaca
gaagtgaatcctatgccgccacactatatttgtcccaatccagactgtaaacattctgaa
tttatcacggatggttctgtgggttcaggctatgatttgcctgataaaatctgttcggaa
tgcggcactccgtacaagaaagatggtcaggatattccttttgagaccttccttggtttt
gacggagacaaagttcctgatattgacttgaacttttcaggtgatgatcagccgagtgct
cacttagatgtgcgtgatatttttggtgaagaatacgcctttcgtgcaggaacagttggt
acggttgcagatagaacggcttatggctttgtcaaaggctacgaaagagattatggcaag
ttttaccgcgatgcagaagttgataggctggcgcagggttcagccggtgtcaaacgaaca
actggacagcaccccggtgggatcgttgttattccaaactatatggatgtttatgatttt
acacctgttcagtatcctgcggatgatttaacagccgaatggcaaacaacccactttaac
ttccatgatattgatgaaaatgttcttaaacttgatgtgcttggtcatgatgatcccacc
atgattcgcaagttgcaggatttgtctggtattgatccaaaaacaattcctgctgacgat
ccagaagttatgaaactgttttcaggaacagaagtcttgggagttactgaggaagagatt
ggaacaccgactggaatgctaggaattcctgaatttggaaccaactttgttcgtggaatg
gtggatgagacccatccaacgacatttgcggagcttttacaattatcaggactttcacat
ggtacagatgtgtggttgggcaatgcacaggatctcatcaaacaaggcattgcaacgctg
tcaacggttattggttgtcgtgatgatattatggtttatcttatgcatgctggtttagaa
cctaagatggcctttactattatggagcgtgtacgtaaaggggcttggctgaagatttcg
gaggaagagcgaaacgggtatatctcagccatgcgtgagaataatgtgccggattggtat
attgaatcctgcggaaaaattaaatacatgtttcctaaagcccatgcggcggcttatgtc
ttgatggctcttcgtgttgcttattttaaggtgcatcacccaatttattattactgtgct
tatttctctattcgtgccaaggcttttgaattaaagacaatgagtgctggtttggatgct
gttaaggcacgcatggctgatattagtcaaaagagaaaaatcaaccaagcttcaaatgtt
gagattgatctttttacaaccttagaaattgtcaatgaaatgttggagagaggtttcaaa
tttggacagctggacttgtatcgcagtgatgccactgaatttatcattgatggcgataca
ttgatacctccttttgtggctttggaaggtttgggcgaaaatgttgccaaacaaatcgta
aaagcacgtaatgaaggagagtttctttctaagacagaactgcgtaaacgcggcggtttg
tcatcaactttggttgaaaagatgagcgatatgggaattttaggcagtatgcctgaagat
aatcaattgtcactttttgatgatttcttttaa
DBGET
integrated database retrieval system
