Streptococcus mutans UA159-FR: SMUFR_0392
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Entry
SMUFR_0392 CDS
T03797
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
smua
Streptococcus mutans UA159-FR
Brite
KEGG Orthology (KO) [BR:
smua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smua03019
]
SMUFR_0392
03009 Ribosome biogenesis [BR:
smua03009
]
SMUFR_0392
Enzymes [BR:
smua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMUFR_0392
Messenger RNA biogenesis [BR:
smua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMUFR_0392
Ribosome biogenesis [BR:
smua03009
]
Prokaryotic type
rRNA helicases
SMUFR_0392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
Alp7A_like_C
Motif
Other DBs
NCBI-ProteinID:
AJD54867
LinkDB
All DBs
Position
426273..427616
Genome browser
AA seq
447 aa
AA seq
DB search
MLFTDFKFKNYINNALANLHFEGPTEVQERLIPLILSGKDLVGESKTGSGKTHTFLLPIF
EKLEEDSLDVQAVITAPSRELARQIYEAAKQIAQFSEQNIRLANYIGGTDKLRQVEKLKA
TQPQIMIGTPGRIYDLVKSGHLDIHKAHTFVVDEADMTLDLGFLDTVDKIAASLPKDIQL
LVFSATIPQKLQPFLKKYLNHPIIEKIKTSTVIADTISNWLISTKGRDKNQQILEIVKSL
KPYLAIIFANTKDRVDDLHAFLSANGFKTAKIHGGIPPRERKRIMNQVKQLDFEYIVATD
LAARGLDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GIVFVPKVLKNGEFQDTYDRDRRLNRKKTQEKLDLEMMGLVKKKKKKIKPGYKKKIQWKV
NEKRRKERRFVKRAQNRANRKAKKQRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttatttacagattttaaatttaaaaattatattaacaatgctttggcaaacttacat
tttgaaggaccgacggaggttcaagaacgcctgattccacttatcttatctggaaaagat
ttggttggtgaatcaaaaacaggatcaggaaagactcatacttttttgttacctattttt
gaaaaattagaagaagattctttagatgttcaagccgttatcactgcaccaagccgtgaa
ctcgccagacaaatttatgaagctgctaaacaaattgctcaattttcagaacaaaatatt
cggcttgctaactatattggcgggactgataaacttcgtcaagttgaaaaactaaaagca
actcagccacaaattatgattgggacaccgggtcgtatttatgatttagttaaatctggg
catcttgatatccataaagctcatacttttgttgtagatgaagcagatatgactcttgat
ctgggcttcttagatacagttgataaaattgctgcaagtttgcctaaagatatacagctc
cttgttttttcagcaaccattcctcaaaaattacagccttttttgaaaaaatatctaaat
catcctattatagaaaaaatcaagaccagtacagtcattgcagacaccattagcaattgg
ctgatttcaactaagggacgcgataaaaatcagcaaatattagagattgtaaagagtttg
aaaccctatttggccattatctttgctaataccaaagaccgtgttgatgatcttcacgct
ttcttgtctgctaatggttttaaaactgcaaaaattcatggtggaattccgccgcgtgaa
cgtaagcggattatgaatcaggttaagcaactagattttgaatacattgtagcgacagat
ttagctgcacgtggcttagatattgaaggcgttagtcatgtgattaatgatgcgattcct
caagatttatcattctttgttcaccgtgttggccgaacaggccgcaatggtctttctggt
acagctatcacgttatatcaacccagtgatgattctgatatcagagaacttgagaagtta
gggatagtctttgttcctaaagtcttaaaaaatggggagtttcaggatacttatgatcgg
gatcggcgcctcaatcgtaagaaaacgcaggaaaaacttgatctggaaatgatgggtctg
gtcaaaaagaaaaagaagaaaatcaaaccgggatacaagaagaaaattcagtggaaagtt
aatgaaaaacgtcgtaaagaacgccgttttgttaaacgtgcccaaaatcgtgctaatcgt
aaagctaaaaaacaacgtttttga
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