Streptococcus mutans UA159-FR: SMUFR_0408
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Entry
SMUFR_0408 CDS
T03797
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
smua
Streptococcus mutans UA159-FR
Pathway
smua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUFR_0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smua03019
]
SMUFR_0408
Messenger RNA biogenesis [BR:
smua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMUFR_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
E3_UbLigase_EDD
PA26
EpuA
dUTPase
Motif
Other DBs
NCBI-ProteinID:
AJD54883
LinkDB
All DBs
Position
443715..445322
Genome browser
AA seq
535 aa
AA seq
DB search
MLNILLTLVFSLIGLVIGYAVISARLKKAKETAELTLLNAEQDAVNARSKAEMDAEHIKK
TAERESKAYKKELLIEAKEEARKYREEIEKEFKSERQELKQMDARLTERAASLDRKDENL
SSKEQLLDSKEQSLSDKSRHIDERELQVKQLEVKKAEELEKIASLSQEQARGIILSETEK
NLAHDIANRIKEAEREIKDRTDKTAKDLLAQAMQRLAGDYVAEQTITTVHLPDDSMKGRI
IGREGRNIRTLESLTGIDIIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGAPNLHPDLIKLMGRLQFRTSYGQNVLRHSVEVGK
LAGLLASELGENVDLARRAGFLHDIGKAIDREVEGSHVEIGTEFARKYKENPVVINTIAS
HHGDVEAQSVIAVLVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSYALQ
AGREIRIMVQPEKLSDDDVTILAHKVREKIENNLDYPGNIKVTVIRELRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatattcttttaactcttgttttctccctcattggtttggttattggttatgca
gttatttcggctcgtttaaagaaagctaaagaaaccgcagaactgactcttttaaatgca
gaacaagatgctgtcaatgctcgcagtaaagctgaaatggatgctgagcatatcaaaaaa
acagcagaacgtgaaagtaaggcctataaaaaggaactgcttatagaagcaaaagaagag
gctagaaaatatcgtgaagagattgaaaaagaatttaagtctgaaagacaagagctcaaa
caaatggatgcgcgtttgacagagcgtgcagcatctcttgatcgtaaagatgaaaatcta
agcagcaaagaacaattgcttgatagtaaagagcaaagtctatccgataaatctaggcat
attgatgagcgtgaactacaagttaaacaattagaagttaaaaaggctgaggaacttgag
aaaatagcgtccttaagtcaagaacaagcacgcggtattattctttcggaaacagagaaa
aatttagcgcatgatattgcgaatcgtattaaagaagcagagcgtgaaatcaaagataga
acggataaaacggctaaagatttgttagctcaagctatgcaacgtctagcaggagattat
gtagctgaacagaccattacgacagttcatctccctgatgatagcatgaaaggtcgtatt
atcggccgcgaaggtcgtaatatccgaacgcttgagagcttgacaggtattgatattatt
attgacgacacaccagaggtggttgttttatcaggctttgatcctattcgtcgagaaatt
gctcgtatgactttagaagcgcttatccaagatggccgtattcatcctgctcgaattgaa
gaattagttgagaagaatcgtctggaaatggacaatcggattcgtgaatatggtgaagct
gccgcctttgaaattggcgctcccaatcttcaccctgatttgattaaactgatgggacgt
ttgcaatttagaacgtcttatggacaaaatgttcttcgtcattctgttgaagttggtaaa
ttagctggacttttggccagtgagttaggtgaaaatgttgatttagctcgccgtgccggt
tttctacacgatattggaaaagctatcgaccgtgaggttgaaggcagtcatgttgagatt
ggaacagaatttgctcgtaaatacaaggaaaatcctgttgtgattaacactattgctagt
caccatggtgatgtggaagctcaatcggtcattgctgttttagttgctgctgctgatgcg
ctcagttcagctcgtccgggtgctcgcaatgagtctatggaaaattacatcaaacgtctg
cgtgatttagaagaaatagcaacaagctttgatggtgttcaaaatagctatgccttgcaa
gcaggccgtgaaattcgcattatggttcagccagaaaaactttctgatgatgatgtcacc
attttagctcacaaggttcgtgaaaaaattgaaaacaatttggattatccaggtaatatt
aaagttacagtcattcgtgaacttcgtgcgattgattatgctaaatga
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integrated database retrieval system