KEGG   Streptococcus mutans UA159-FR: SMUFR_0531
Entry
SMUFR_0531        CDS       T03797                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
smua  Streptococcus mutans UA159-FR
Pathway
smua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMUFR_0531 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smua03019]
    SMUFR_0531 (deaD)
   03009 Ribosome biogenesis [BR:smua03009]
    SMUFR_0531 (deaD)
Enzymes [BR:smua01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SMUFR_0531 (deaD)
Messenger RNA biogenesis [BR:smua03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SMUFR_0531 (deaD)
Ribosome biogenesis [BR:smua03009]
 Prokaryotic type
  rRNA helicases
   SMUFR_0531 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 NAT10_TcmA_helicase
Other DBs
NCBI-ProteinID: AJD55004
LinkDB
Position
574178..575731
AA seq 517 aa
MKFTELHLAEDILSAVAKVGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDVTNNVVQALVIAPTRELAVQSQEELFRFGREKKVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDAIKRIGVKFMKEPEHVKIAAKELTTDLVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLQIIEKLTKK
RMKGMKPATAQEAFQASKKVALKKIERDFADEKIRSNFDKFTKDAEKLAAEFSPEELAQY
ILTLTVQDPEMLPKVEIAREKPLPFKFAGKGKGGNRRREDRRGGRDSRRNHRDGGRREFK
RTSNKNRKDFENKSNKRPHRTSSEKKSGFTIRNKGDR
NT seq 1554 nt   +upstreamnt  +downstreamnt
ttgaaatttacagaattacatttggcggaagacattctttctgctgttgcaaaagtcggc
tttgttgagccatcacctatccaagaattgactattcctcttgcccttgaaggaaaagat
gttattggtcaagcacaaactgggacaggaaaaacagcagcctttggtctgccaaccctg
aataagattgacgtgactaataacgttgttcaagcccttgttattgcgccaacgcgagaa
ttggctgttcaaagtcaagaggagctctttcgttttgggcgtgaaaagaaagttaaagtt
cgttcggtttatggtggttcaagcattgaaaaacaaattaaggctcttaaatcaggagcc
catattgttgttgggacaccgggacgtctgcttgatttgattaaacgcaaggcgcttaaa
ttaaatcatgtggaaacccttattttggatgaagcagatgaaatgctcaacatgggcttt
ttagaagatattgaagccattatttcacgtgtaccagaaacacgccaaaccttgctcttt
tcagcaaccatgccagatgccatcaaacgtattggcgtaaagttcatgaaagaaccagaa
catgttaagattgctgccaaagaattaacaacagatttggtggatcaatattatatccgt
gtcaaggaaaatgaaaaatttgatacgatgacccgtcttatggatgtggaacagccagaa
ctttctatcgtttttggccgtactaagcgccgtgttgatgagttaacaagaggattaaaa
ctgcgtggctatcgtgcggaagggattcatggggatctcgatcaagggaaacgtctgcgt
gttcttcgggattttaaaaatgataaccttgacattttggtcgcgacagatgtggcggct
cgtggtctcgatatttcgggcgtcactcatgtttataactatgatattccgcaagaccct
gaaagttatgttcatcgcattggtcgtacaggtcgtgctggtaagcacggtcagtcaatc
acttttgtggctcccaatgaaatgggctatcttcaaattattgaaaagctcactaaaaaa
cgcatgaaaggcatgaaacccgctacagcgcaagaagcctttcaagcaagcaaaaaagtg
gccctcaaaaagattgagcgtgactttgctgatgaaaagattcgttctaattttgataag
tttaccaaagatgctgaaaaattggctgctgaattttcaccagaagaattagcacaatat
atcttgactctaactgttcaagatccagaaatgctgcctaaggttgaaattgctcgcgaa
aaacccttgccatttaaatttgctggtaaaggaaagggcggcaatcgtcgtcgtgaggat
cgtcggggaggtcgcgacagtcgccgtaatcatcgtgacggtggccgtcgtgaatttaaa
cggacttctaacaaaaatcgcaaagattttgaaaataagagcaataaacgtcctcaccgt
acttccagcgaaaagaaaagcggctttaccattcgcaataaaggtgacagataa

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