Streptococcus mutans UA159-FR: SMUFR_1277
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Entry
SMUFR_1277 CDS
T03797
Name
(GenBank) single-strand DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smua
Streptococcus mutans UA159-FR
Pathway
smua03410
Base excision repair
smua03430
Mismatch repair
smua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMUFR_1277
03430 Mismatch repair
SMUFR_1277
03440 Homologous recombination
SMUFR_1277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smua03400
]
SMUFR_1277
DNA repair and recombination proteins [BR:
smua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SMUFR_1277
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SMUFR_1277
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SMUFR_1277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJD55748
LinkDB
All DBs
Position
complement(1398092..1400296)
Genome browser
AA seq
734 aa
AA seq
DB search
MITSKYAWKINEKKPDDGFFELAKKENLNPTAAQILYERGFKTSKDIEAFLRPDLSQLHD
PFLLNDMDKAVTRIRRAIETNERILIYGDYDADGMTSSSIAKEALEMLGAEVEAYLPNRF
TDGYGPNLSVYKYFIEQQDISLILTVDNGIAGHDAIAYAQGQGVDVIVTDHHSMPAELPS
AYAVVHPEHPDANYPFKCLAGCGVAFKLACALLESIPTEMLDLVAIGTIADMVSLTDENR
VMVKYGLEILKQTERVGLQELIALAGVDFADINEETIGFKLAPQLNALGRLDDPNPAVEL
LTGFDDEEAKTIAAMINEKNEERKTIVQAIFEEAMTLVDENKSVQVLAKEGWHAGVLGIV
AGRIMEQINQPVIVLNIENGLAKGSARSLESVNIFNALDAHRDLFMAFGGHAGAAGMTLE
ADKLEELSQVLNDYIQEHAIDLSQKSALVIDEELYLPELSLDTLKGLETLAPFGMNNKKP
IFLLRDFTVKQVRTMGQNGAHLKLKVAQEQAVFDLLAFNYGSLVTEFQQAQHLELAVTLS
VNRWNGNTSLQLMLVDARVEGIQLLDIRARNSALPDGVPFLEDQTDSKAVVLFEIPEKEE
DLLALFENRDFEVIYFKNRIKHQYYLTGSGTREQFAKLYKTIYQFPEFDVRHKLKELSQF
LKIPDILLVKMIQIFDELDFVSIDDGIMTVNKDAQKREISDSHIYQDLKKLVKFQELMAL
GTPQEIYEFLKRDR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattacttccaaatatgcttggaaaataaatgaaaaaaagccagatgatggctttttt
gagctggctaaaaaagaaaatctcaatcctacagctgcacaaattttatatgagcgaggt
tttaaaacaagtaaagatatagaagcgtttttgagacctgatttgtctcaattacatgat
ccctttcttttaaatgatatggacaaggctgtcacgcgtattcgcagagctattgaaacc
aatgaacgaattcttatctatggggattacgatgctgatggtatgacgtcaagttccatt
gcaaaggaagctttggaaatgctgggagctgaggtagaggcttatcttcctaatcgtttt
accgatggttatggtcccaatctcagtgtttataaatattttattgagcagcaggatata
tcactgattcttactgtggataatggtattgctggccatgatgctattgcttatgcgcaa
ggacaaggtgttgatgtcattgttactgaccaccacagtatgcctgctgagcttccttca
gcttatgctgtcgttcatcctgaacatccagatgctaattatccttttaaatgtttagca
gggtgcggtgtcgcttttaagctagcctgtgccttgttagaatccattccgacagagatg
ctggatttggtggctattggaaccattgccgatatggtatcgctcaccgatgaaaatcgt
gtaatggtcaaatacggtcttgaaatcctaaaacaaacagagcgcgtcggtctgcaagaa
ttaatagcacttgcaggtgttgattttgctgatatcaatgaagaaaccattggtttcaag
ttagcaccccagcttaatgctttgggacgtctggatgatcccaatcctgctgttgaattg
ttgacaggctttgatgatgaagaagcaaagactattgcggccatgattaatgaaaaaaat
gaggagcgaaagaccattgtacaggctatttttgaagaagctatgactctggttgatgag
aacaaatctgttcaggtcttggctaaagaaggctggcatgctggtgttctggggattgtt
gcaggtcgtattatggaacaaataaaccagccagtcattgttcttaatattgaaaatggc
cttgccaagggaagtgcccgtagtttagagtcagtcaatatttttaatgcccttgatgcg
catagggatttatttatggcttttggaggccatgctggagctgcaggtatgactctagag
gctgataaattagaagaattatcacaggttttaaatgattatattcaagaacatgcgatt
gatttatcgcaaaagtctgctttagtaattgatgaagaattgtacttgccagaacttagt
ttagatactttaaaagggcttgaaactttggctccttttggtatgaacaataaaaaacct
atttttttactaagggattttacagtcaaacaggttagaacgatgggacaaaatggagct
catttgaagttaaaagtggctcaggaacaggctgtctttgatctccttgcctttaactac
ggttcgctcgtgacagaatttcaacaagctcagcatctcgaactagctgttactttatcg
gttaatcgttggaacggcaatactagtctacaattgatgctagttgatgcgcgtgttgaa
ggcattcagttgcttgatatccgtgctcgcaatagcgctctgcctgacggagttcccttt
ttagaagatcaaacagatagtaaggcagttgtcttatttgaaataccggaaaaagaagaa
gaccttctagcactttttgaaaatcgggattttgaagtcatttattttaaaaataggatt
aagcatcaatattatttaacaggatctggaacgcgtgagcaatttgctaagctttacaag
acgatttaccagtttccggaatttgatgtacgtcataagttaaaagagctcagtcaattt
ctcaaaattccagatattttgctggtcaagatgatccaaatttttgatgaattggacttt
gtttccattgatgatggcattatgacagttaataaagatgctcaaaaacgggaaatttct
gacagtcatatttatcaagatttgaaaaaattagtgaaattccaagagttaatggcatta
ggaacacctcaagaaatatatgaatttttaaaacgcgatcgctaa
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