Candidatus Karelsulcia muelleri BGSS: IM46_388
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Entry
IM46_388 CDS
T03352
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
smub
Candidatus Karelsulcia muelleri BGSS
Brite
KEGG Orthology (KO) [BR:
smub00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IM46_388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smub03021
]
IM46_388
Transcription machinery [BR:
smub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM46_388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
GPW_gp25
Hemolysin_N
Motif
Other DBs
NCBI-ProteinID:
AIN47753
LinkDB
All DBs
Position
complement(206413..207441)
Genome browser
AA seq
342 aa
AA seq
DB search
MKKQNIITIPNGESESLSLDKFLLEISNIPLLSQEEEFFWAKLARVGYISNSEIESILKK
LKIFKIFKKLKKLKQLKQLKKLKKIKKLTAVLIKKFDKKGIKKYALDNLVKANLRFVISI
AKQYQNQGLSLSDLINEGNFGLIKGINRFDERKGFKCISYCVWWIRQSILQAISDKARCV
RYPTNKLAFYNKVNKTYSKLEQKLKMPPSIKYISDYLNVSEKDVEEALINSIKHTSLDAP
LGEGDNSNLYDVIKIDESPKTDHSLEKESLQQDIKILLETLSERESQIITLHYGLGCFSM
NLEKIAYLLKLTRERCRQIEMHAIKRLKKSSRKEILLSYLCK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaaacattataactattcctaatggggaatctgagtctttatctttagat
aaatttttacttgaaataagtaatataccattattaagtcaagaagaagaatttttttgg
gctaaattagctcgagtaggatatatttctaattctgaaatagaatcaatattaaaaaaa
ttaaaaatattcaaaatattcaaaaaattaaaaaaattaaaacaattaaaacaattaaaa
aagttaaaaaaaataaaaaaattaaccgcagtattaataaaaaaatttgataaaaaggga
ataaaaaaatacgcacttgataatttagttaaagcaaatttaagatttgtaatttctata
gcaaagcaatatcaaaatcaaggattaagtttatctgatttaattaatgagggaaatttt
ggtctcataaaaggtataaatcgttttgatgaaagaaaaggatttaaatgtatttcttat
tgtgtatggtggataagacaatctatattacaagctatatcggataaagctcgttgtgta
cgttatcctacaaacaaactagctttttataataaagttaataaaacatattctaaatta
gaacaaaaacttaaaatgcctccatcaataaaatatattagtgactatttaaatgtcagt
gaaaaagatgttgaggaagctctgataaattcaattaaacatacatctttagatgctcct
cttggagaaggagataattctaatttatatgatgtgataaaaattgatgaatcacctaaa
actgatcactctttagaaaaagaatctcttcaacaagatataaaaatattattagaaact
ctttcagaaagagaatctcaaataattacattacattatggattaggatgtttttctatg
aatttagaaaaaatagcatatctattaaaattaactagagaacgttgccgacaaatagaa
atgcatgcaattaaaagattaaaaaaatcttctcgtaaagaaatattactatcatactta
tgtaagtag
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