Candidatus Karelsulcia muelleri BGSS: IM46_452
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Entry
IM46_452 CDS
T03352
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smub
Candidatus Karelsulcia muelleri BGSS
Pathway
smub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM46_452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smub03021
]
IM46_452
03400 DNA repair and recombination proteins [BR:
smub03400
]
IM46_452
Enzymes [BR:
smub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM46_452
Transcription machinery [BR:
smub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM46_452
DNA repair and recombination proteins [BR:
smub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM46_452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
NAS
Motif
Other DBs
NCBI-ProteinID:
AIN47785
LinkDB
All DBs
Position
225256..225966
Genome browser
AA seq
236 aa
AA seq
DB search
MVFLKFKQSKNLRVLKLTPEEGLFKIEPLFPGWGVTIGNTLRRVLLSSLEGYAISSVKIE
GVNHEFSTIKGVIEDMTEIILNLKKVRFKKNKKKENFESEVFNMIISNDKEEITAGDLGK
YINKFDILNPDLIILNKQKLISLDISIVIKKGIGYVPSEENLIGSGSIPMDSIFTPIKNV
KYKIDNCSINKNSNYESLLLEIKTDGSINPRDALTNASNILIQHLKMFIYETRKKK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggtttttttaaaatttaaacaatcaaaaaatttaagagtattaaaattaactcctgaa
gaaggattatttaaaatagaaccgttatttcctggatggggagtaacaattggaaatact
cttagaagagtgcttttatcttctttagaaggatatgcaatatcgtcagttaaaattgaa
ggagtaaatcatgaattttctacgataaaaggggtaatagaagatatgacagaaattatt
ttaaatctgaaaaaagtacgttttaaaaaaaacaaaaaaaaagaaaattttgaatcagaa
gtatttaatatgataatatctaatgataaagaagaaataactgctggtgatttaggaaaa
tatattaataaatttgatatattaaatcctgatttaataattttaaataaacaaaaatta
atatctttagatataagtattgtaataaaaaaaggaataggttatgtaccttcagaagaa
aatttgataggatcaggatcaattccaatggattctatatttactcctataaagaatgta
aaatataaaatagataactgtagtatcaataaaaattcaaactatgaaagtttgttatta
gaaataaaaactgatgggtctataaatcctagagatgcattaaccaatgcctctaatata
ttaatacaacatttaaaaatgtttatatatgagacacggaaaaaaaaataa
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