Skermanella mucosa: JL100_000015
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Entry
JL100_000015 CDS
T07652
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
smuc
Skermanella mucosa
Pathway
smuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL100_000015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_000015 (recF)
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JL100_000015 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_29
AAA_15
ABC_tran
SbcC_Walker_B
AAA_30
AAA_27
Y4rL_C
cobW
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UEM24163
LinkDB
All DBs
Position
SKMUc:2873..4051
Genome browser
AA seq
392 aa
AA seq
DB search
MSSGPMALRDAPAPRLAVTRLTLTQFRCYDGARLNADARPVVLTGPNGAGKTNLLEAVSF
LSPGRGLRRARLADVERIGAPGGSGWAVAARVETPFGPVDIGTGRDGAADGASERRLVRI
DGHPVRGQVALAEHVALTWLTPQMDRLFVEGSSGRRRFLDRLVFGFDPAHAGRLSRYEHA
LRERGRLLRDGRGDDAWLSALEDEMATSGVAVAAARRDMVARLQQACEQATGPFPRADLA
VSGTVEDWLADQPALAAEDALRRRLSESRRHDGSGNAGEGGTAGPHRSDLAVRHRGKDMP
AEFCSTGEQKALLIAIVLANARLMAAERGQPPLMLLDEVAAHLDADRRSALFGEILDLGA
QAWLTGTDAGIFAELGDRASFFRVEDAHVHPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaggcccgatggccttgcgcgacgcgcccgcccccaggctggcggtcacgcgc
ctgaccctgacccagttccgctgctatgacggcgcgcggctcaacgccgacgcgcgcccg
gtcgtgctgacggggccgaacggcgccggcaagaccaacctgctggaagccgtcagcttc
ctgtcgcccggccgcggcctgcgccgcgcccgcctggccgacgtggagcggatcggggcg
cccggcggcagcggctgggcggtcgcggcccgggtcgagacgccgttcggcccggtcgat
atcggcaccggccgggacggcgccgccgacggcgcgtcggaacgccgcctcgtccggatc
gacggccatcccgtgcgcggccaggtggcccttgctgagcatgtcgcgctgacctggctg
acgccccagatggaccgcctgttcgtcgaggggtcgagcggccgccgccgcttcctggac
cgtctggtgttcggcttcgaccccgcccatgccgggcggctcagccgttacgagcacgcg
ctgcgcgagcgcgggcgcctgctgcgcgacgggcgcggcgacgacgcctggctgtccgcg
ctggaggacgagatggcgacctccggcgtcgcggtcgccgccgcccggcgcgacatggtg
gcgcggctccagcaggcctgcgagcaggcgaccggcccgttcccgcgcgccgacctcgcg
gtctccggcacggtggaggactggctggccgaccagccggccctggcggccgaggacgcg
ctgcgccgccggctctccgagtcccgccgccacgatggctccgggaacgcgggggagggc
ggcaccgcgggtccccaccgcagcgacctcgcggtccgccaccgcggcaaggacatgccg
gccgagttctgctcgaccggcgagcagaaggccctgctgatcgccatcgtcctggccaac
gcccggctgatggcggcggagcgcggccagccgcccctgatgctgctggacgaggtggcg
gcccacctggacgccgaccggcgcagcgccctgttcggcgagatcctggatctcggcgcc
caggcctggctgaccggcaccgacgccggcatcttcgccgagctgggcgaccgggccagc
ttcttccgcgtggaggacgcccatgtccatccggcctga
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