Skermanella mucosa: JL100_001510
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Entry
JL100_001510 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_001510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_001510
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL100_001510
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM21475
LinkDB
All DBs
Position
SKMUc:complement(323932..325422)
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AA seq
496 aa
AA seq
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MRSPPLLIAAALLAAGALMPAGASAQNRDRLVIGMQLEPPHLDPTAGAAAAIDEVTYSNL
FESLTRIDARGEVVPGLAESWEVSPDGLTYTFKLRSGVKYHDGTGFDSADVKFALDRARG
ADSVNAQKGYFAAIGSVETPGPLTVAVTLTRPDGQFLFNMGSNDAAIVAPESAATNRQKP
VGTGPFRFDRWVSGDRVVLARNPDFRDPAVPKLGEVVFRFISDPAAQLNAVRSGDVDAFP
NIGATESLPVLEADKSFTVTVGTTEGETVLALNNARKPFDDVRVRRAVAHAVNRQEVIDG
AMFGYGTPIGSHFAPHRAGYVDLTGLYPHDPAKARALLAEAGYPDGFDAVIRLPPPVYAR
RGGEIIAARLAEAGIRLRIEPMEWAPWLEQVFRGRDFDMTIVSHVEPLDIDIYDRPDYYF
GYRSDRFAAVMEELSRTVEPERRAALYGDAQRILAEDSVNVFLFQLPKAGVHKAGLTGLW
ENSPVPANDVTDVSWK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagatccccacccttgctgatcgccgcggcgttgctggcggcgggcgccctgatgccg
gcgggagcctcggcgcagaaccgcgaccgcctggtcatcggcatgcagcttgagccgccg
cacctggacccgacggccggcgccgccgcggcgatcgacgaggtgacatattccaacctg
ttcgagagcctgacccggatcgacgcgcggggcgaggtggtccccggactggcggaaagc
tgggaggtgtcgcccgacggcctgacctacaccttcaagctgcggtcgggggtcaaatac
catgacggcaccggattcgactccgccgacgtcaagttcgcgctggaccgggcgcgcggg
gccgactcggtcaatgcccagaaaggctatttcgcggcgatcggatcggtcgagacgccc
ggcccgctgaccgtcgccgtcaccctgacccgcccggacgggcagttcctgttcaacatg
ggctccaacgacgccgccatcgtggcgcccgaatccgccgcgacgaaccggcagaagccg
gtcggcaccggcccgttccggttcgaccgctgggtttccggcgaccgcgtcgtgctggcg
cgcaaccccgacttccgcgacccggcggtgccgaagctcggcgaggtggtgtttcgcttc
atcagcgatccggcggcccagctgaacgccgtccgctccggcgacgtggacgccttcccc
aacatcggcgccaccgaatccctgccggtcctggaggccgacaagagcttcaccgtcacc
gtcggcaccaccgagggggagacggtgctggcgctcaacaacgcccgcaagccgttcgac
gatgtccgggtgcgccgcgccgtggcccacgcggtcaaccggcaggaggtgatcgacggc
gccatgttcggctacggcacgccgatcggcagccacttcgccccgcaccgcgccggctac
gtggacctgaccggcctgtatccccacgaccccgccaaggcgcgcgcgctgctggcggaa
gccggatatcccgacggcttcgacgcggtgatcaggctgccgccgccggtctatgcccgg
cgcggcggggagatcatcgcggcccggctcgccgaggccggcatccgcctgcggatcgag
ccgatggaatgggcgccctggctggaacaggtgttccgcggccgggacttcgacatgacc
atcgtctcccatgtcgagccgctggacatcgacatctacgaccggcccgactattacttc
ggctatcgcagcgaccgcttcgccgccgtcatggaggagctgagccgcaccgtcgagccg
gaacgccgcgccgccctgtatggcgacgcccagcgcatcctggccgaggacagcgtcaac
gtcttcctgttccagctgcccaaggcgggggtccacaaggccgggctgaccggcctgtgg
gagaacagcccggttccggccaacgacgtgaccgacgtctcgtggaagtga
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