Skermanella mucosa: JL100_001545
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Entry
JL100_001545 CDS
T07652
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smuc03021
]
JL100_001545 (rpoH)
Transcription machinery [BR:
smuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL100_001545 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UEM21482
LinkDB
All DBs
Position
SKMUc:333651..334550
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AA seq
299 aa
AA seq
DB search
MTLLNIAQAGGGMGRYLDEAKRFPMLNPEQERDLAVAWRERGDEEALRLLTGSHLRLVIK
IARGFAGYGLPASELIAEGNVGLMQAAQKFDPDRGFRFATYAIWWIRAAIQEYILHNWSM
VKMGTTAAQKKLFFNLRRLKGRMEELEQGDLSPATVTTIATELDVPETEVVEMNRRLTMG
DSSLNAAVGAEGDTDWLDLLSDDRPTQESVVAEADELALRRRLLGQALEKLNDRERQILL
ERRLAEEPATLEVLGERYAVSRERIRQIEARAFEKLQKAVLNAAQALRKPAGQPMLAAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacattgttgaatatcgcgcaggccggcggcggcatgggccgctacctggacgaagcg
aaacgctttcccatgctgaaccccgagcaggagcgggacttggcggtcgcctggcgcgag
cgcggcgacgaggaagccctgcgcctgctgacgggcagccacctgcgtctggtgatcaag
atcgcgcgcggtttcgccggttacggcctgcccgcgtcagagctgatcgccgagggcaac
gtgggcctgatgcaggcggcccagaagttcgaccccgaccgcggcttccgattcgcgacc
tacgcgatctggtggatccgcgcggcgatccaggaatacatcttgcacaactggtcaatg
gtcaagatgggcaccacggccgcccagaagaagcttttcttcaacctgcgccgcctgaag
ggccggatggaggaactggagcagggcgacctgtcgccggccacggtcaccaccatcgcg
accgagctggacgtgccggagacggaggtggtcgagatgaaccgccggctgaccatgggc
gacagttcgctgaacgcggccgtgggggcggaaggcgacaccgactggctggacctgctg
tcggacgaccggccgacccaggaatcggtggtcgcggaggccgacgagcttgcgctgagg
cggcgcctgctgggccaggccctggagaagctgaacgaccgcgagcggcagatcctgctg
gaacgccggctggcggaagagccggccacgctggaggtgctgggcgagcgctacgccgtg
tcgcgcgagcggatccggcagatcgaggcgcgggcgttcgagaaacttcagaaggcggtg
ctgaacgccgcccaggccctgcgcaagcccgcgggccagccgatgctggccgcgggctga
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