Skermanella mucosa: JL100_001890
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Entry
JL100_001890 CDS
T07652
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smuc03036
]
JL100_001890 (xerD)
Chromosome and associated proteins [BR:
smuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JL100_001890 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
UEM21548
LinkDB
All DBs
Position
SKMUc:403809..404786
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AA seq
325 aa
AA seq
DB search
MARPGRPRKPKTLASPRVEAFLDMLVAERGAAHNTRQAYERDLIDAASWLSKRGTGLDGA
GTDDLRGYLDHLSGLDGGTAVRTIARRLSALRQFYRFLCSEGLRTDDPAATIDSPKQGRP
LPKILTEVEVETLLAAAQRRGGPDGIRLVALLEVLYATGLRVSELVGLPLTGIARDARCL
IVKGKGGKERMVPLSEPAREALSAYMPLRKAFMVPGREQRQAGFLFPSRTSEDGHLTRQR
FAQLLKELAIDAGIEPRKVSPHVLRHAFATHLLDHGADLRSVQKMLGHADIATTQIYTHV
VGDRLRRVVNDHHPLARQKKLAGAD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcccggacgcccccgaaaacccaagacgctggcgtcgccgcgcgtcgaggcc
ttcctcgacatgctggtggccgagcgcggcgccgcgcacaacacgcgccaggcctatgaa
cgggacctgatcgacgcggcgtcatggctgtcaaagcgcggcaccggcctcgacggcgcc
ggcaccgacgacctgaggggatatctcgaccatctcagcgggctggacggcgggaccgcg
gtccgcacgatcgcccggcggctgtcggcgcttcggcagttctaccggttcctgtgctcg
gaggggctgcgcaccgacgatccggcggcgaccatcgacagccccaagcagggccgcccg
ctgcccaagatcctgaccgaggtcgaggtcgagacgctgctggcggcggcccagcgccgc
ggcggcccggacggcatccggctggtggcgctgctggaagtgctctacgccaccggcctg
cgcgtgtcggaactggtcgggctgccgctgaccggcatcgcgcgggacgcccgctgcctg
atcgtcaagggcaagggcggcaaggagcgcatggtgcccctgtccgagccggcgcgcgag
gcgctgtccgcctacatgccgctgcgcaaggccttcatggtgccggggcgggagcagcgc
caggccgggttcctgttcccgtcccgcacgtcggaggacgggcacctgacccgccagcgc
ttcgcccagctgctcaaggaactggcgatcgacgccgggatcgagccgcgcaaggtcagc
ccccacgtgcttcgccacgccttcgcgacccatctgctggaccatggcgccgacctgcgc
agcgtccagaagatgctgggccacgcagacatcgcgacgacccagatctatacccatgtg
gtcggcgaccgcctgaggcgagtcgtcaacgaccaccaccccctcgcgcggcaaaagaaa
ctcgccggcgccgactga
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