Skermanella mucosa: JL100_002000
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Entry
JL100_002000 CDS
T07652
Name
(GenBank) GAF domain-containing protein
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_002000
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smuc01001
]
JL100_002000
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smuc02022
]
JL100_002000
Enzymes [BR:
smuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JL100_002000
Protein kinases [BR:
smuc01001
]
Histidine kinases
CheA family [OT]
JL100_002000
Two-component system [BR:
smuc02022
]
CheA family
Cph1-Rcp1 (light response)
JL100_002000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
HATPase_c
HisKA
PAS_2
GAF
PAS_4
GAF_3
Motif
Other DBs
NCBI-ProteinID:
UEM21568
LinkDB
All DBs
Position
SKMUc:429375..432143
Genome browser
AA seq
922 aa
AA seq
DB search
MTDLVPTAIPAPEAPSLSDCAREPIHIPGAVQAHGTLLVLAEPDLTVTHAAANLARYLGV
PLEEVLGFPLERSCPAGAAALRAALAEEARGIGPAVRFDFEPPAGRPVLEARFHRHDGRA
LLELEPPGEDAPGGAGPPDLAGFIEYLEGCATRYDIARRTADLVSRSTGFDRVMVYRFLP
DWSGDVIAEVRHATEPAYLGLHFPASDIPLQARELYRVNLLRSIADVRGEVVPLVADPTG
RDVARPVDLGRSNLRAVSPIHLEYLRNMGVGATLVASLMVGGRLWGLIACHHATGRRCGA
GTRDLLSRIALIAAGALERSIAADIAQARRRTEARLAALDGVFDSGRDSVAALLCGDRGL
RDLGMADGVALYVDGAVAAFGRTPDTHEIRHLVERHGTSAPGGTCGAVVATDCLDELEPQ
ASAFDETVAGMLMVELAARPRLVALAFRREVIQEIFWGGDPQKPASAEDGRLSPRKSFER
WRQTVTGRCPPWSPEVVDGWGELPARLVAAAGGADRLADRLVGDIRRFHTWTRFDEPAVH
GLIDVLPGAVLVARRAAGDSVFHAFTMNREFRRIFDIVPDEVAGRRIDDVLSLLGVPPAI
RAMIPGASAETTLMASAAGERTVSISRRSLLKVDTEDDGTALSAWVFQDITSHRRTEEAL
RTARDQALVASRSKSAFLANMSHELRTPLNAIIGFSELLADELFGPLGDAKYKEYVNDIR
HAGEHLLSLISDLLDISKIEAGRRTINEDLIDLGSLVARCCSMISDLARRGDVQLEWHIP
ATAPNLHADARAVRQIVVNLLSNAVKFTPAGGTVTCRTLALQDGGVAIEVQDTGIGIAEE
HLDRVLEPFYQVDNSLTRQVGGTGLGLSLVNAIANLHQGRLVLESKVGCGTTARVEFPPW
RTVPAQDGHSRAGLAVQAAPAA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctagtcccgaccgcgatccccgcgccggaagcgccgtcgctcagcgattgc
gcccgggagccgatccatattccgggcgcggtccaggcgcacggcacgctgctggtgctc
gcggagccggacctgacggtgacccacgcggcggccaacctggcccgctacctgggcgtc
cccctggaggaggtgctgggtttcccgctggagcggagttgcccggccggcgccgcggcg
ctacgggcggccctcgcggaagaggcccgcggcatcggtccggcggtccgcttcgatttc
gagccccctgccggccggccggtgctggaggcccgcttccatcgccatgacggccgggcg
ctgctcgagctcgaaccacccggggaggacgctccgggcggcgccgggccgccggatctc
gccggcttcatcgaatacctcgaaggctgcgccacccgatacgacatcgcccggcggacc
gcggacctggtctcgcggtccacagggttcgaccgggtgatggtataccgtttcctgccg
gactggagcggggacgtcatcgccgaggtcaggcacgccaccgaaccggcctacctaggc
ctccatttcccggccagcgacatcccgctgcaggcgcgcgagctctaccgcgtgaacctg
cttcggtccatcgccgacgtccgtggcgaggtggtgccgctggtcgccgaccccaccggg
cgcgacgtcgcccggccggtcgacctgggccgaagcaacctgcgggcggtctcgccgatc
catctggaatacctgcgcaacatgggcgtcggcgccaccctggtcgcctcgctcatggtc
ggagggcggctatggggcttgatcgcctgccaccacgcgaccgggcggaggtgcggcgcc
gggacgcgcgacctgctgtcccgcatcgccctgatcgccgccggagcgctggagcgcagc
atcgccgccgacatcgcgcaggcccgccggcgcaccgaagcccgcttggcggcgctcgac
ggcgtcttcgacagcggacgggacagcgtcgcggcgctgctctgcggcgaccgcggcctg
cgcgacctcggcatggcggatggcgtggccctctatgtggacggtgcggtggccgcgttc
ggccgcacgccggacacccacgagatccgtcacctggtcgagcgccacggcacttccgcg
cccggcgggacctgcggcgccgtggtcgccaccgactgcctggacgagctggagccgcag
gcgagcgcgttcgacgagaccgtcgccggaatgctcatggtcgagctcgcggcgcggcca
aggctggtggcgctggctttccggcgggaggtcatccaggagatcttctggggcggcgat
ccgcagaagcccgcctccgccgaggatggccggctcagcccgcgcaagagcttcgagcgc
tggcgccagaccgtcacgggccgctgcccgccctggtcgcccgaggtggtggacggctgg
ggggaactgcccgcgcggctggtcgccgcggcgggcggtgcggaccggctggccgaccgg
ctggtgggcgacatccggcgcttccatacctggacccggttcgacgagcccgccgtccac
ggcctgatcgacgtgctgccgggggcggtgctggtggcgcgccgggcggccggggactcg
gtctttcacgccttcaccatgaaccgggagttccggcgcatcttcgacatcgtcccggac
gaggtggccggccgccggatcgacgacgtgctgagcctgctcggcgtgcctccggcgatc
cgcgccatgattccgggcgccagcgcggagaccaccctgatggcgtcggccgccggcgag
cgcaccgtctcgatcagccggcggtcgctgctcaaggtcgataccgaggacgacggcacc
gccctgtcggcctgggtgttccaggacatcaccagccaccgccggacggaggaggcgctg
cgcaccgcgcgcgaccaggcgctggtcgccagccgctccaaatccgccttcctggccaac
atgagccacgaactgcgcacgccgctcaacgcgatcatcgggttttccgaattgctggcg
gacgagttgttcgggccgctgggcgacgccaagtacaaggaatacgtcaacgacatccgc
cacgccggcgagcacctgctgtcgctgatcagcgacctgctcgacatctccaagatcgag
gccgggcggcgcacgatcaacgaggacctgatcgatctcggctccctggtggcgcggtgc
tgctcgatgatctccgacctggcgcgccggggcgacgtccagctggagtggcatattcct
gcgacggcgcccaacctgcacgccgatgcccgggcggtgcggcagatcgtcgtcaacctg
ctgtccaacgcggtgaagttcacgcctgccggcggcaccgtcacctgccgtaccctggcc
ttgcaggacggcggcgtcgcgatcgaagtccaggacaccggcatcggcatcgcggaagag
cacctcgaccgcgtgctggaaccgttctaccaggtggacaacagcctgacccgccaggtc
ggcggcaccggactcggcctgtcgctggtcaacgcgatcgccaacctgcaccagggccgg
ctggtgctggaaagcaaggtcggctgcggaacaacggcgcgggtggaattcccgccctgg
cgcaccgtccccgcccaggacgggcattcccgggccgggctcgcggtccaggcggcgccg
gccgcttga
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