Skermanella mucosa: JL100_002870
Help
Entry
JL100_002870 CDS
T07652
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
smuc
Skermanella mucosa
Pathway
smuc02010
ABC transporters
smuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL100_002870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_002870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_002870
Transporters [BR:
smuc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
JL100_002870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
UEM21725
LinkDB
All DBs
Position
SKMUc:complement(619005..620279)
Genome browser
AA seq
424 aa
AA seq
DB search
MNMKSVILAATAAIALASPALAQVKVGHLADYSGATSDVGVPFGQGVADALAYINKTGGA
GGTQMGVETFDYGYQVPRAISQYKKWSGRDKVVAIQGWGTADTEALITFIAKDEIPYFSG
SYAGQLTDPNGSGEKSTKAAPYNFFYGPSYSDSLRAMLQWAAEDWKAKGGSGKPKYVHMG
ANHPYPNAPKEAGEELAKELGFEVLPAVQFALTPGDYTAQCLTLKDSGANYAYLGNTAGS
NISVLRACDTVGAKVQFMGNVWGMDENAMKAAGKAADGVVFPVRTGVVWGGEAPGMQTVR
EISKVSDASGNAYRPVHYISGICSAFYMKEAMEWAAKNGGITGANIKQGMYQKKDWVPAG
MEGVCVPSTWTPDDHRGTTTVAIYRAKVGGATEASVDELVKAGTIKLEKVTSVDLPRKKE
WLGW
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaagagcgtcatcctggccgcgaccgcggcgatcgccctggcttccccggcc
ctggcccaggtcaaggtcgggcacctggccgactacagcggcgccacgtccgacgtgggc
gttccgttcggccagggcgtggccgacgcgctggcctacatcaacaagaccggcggcgcc
ggcgggacccagatgggcgtcgagaccttcgactacggctatcaggtcccgcgcgcgatc
tcgcagtacaagaagtggtccggccgcgacaaggtcgtggcgatccagggctggggcacg
gccgataccgaggcgctgatcaccttcatcgccaaggacgagatcccctacttctccggc
tcctatgccgggcagctgaccgacccgaacggatcgggcgagaagtcgaccaaggcggcg
ccgtacaacttcttctacggcccgtcctattcggactcgctgcgcgccatgctgcaatgg
gcggcggaggactggaaggccaagggcggttcgggcaagccgaaatacgtccacatgggc
gccaaccacccctaccccaacgcgcccaaggaggccggcgaggagttggcgaaggagctg
gggttcgaggtgcttcccgccgtgcagttcgcgctgacgccgggcgactataccgcccag
tgcctgacgctgaaggacagcggcgccaactatgcctacctgggcaataccgcggggtcc
aacatctcggtgctgcgggcctgcgacacggtcggcgccaaggtgcagttcatgggcaat
gtctggggcatggacgagaacgccatgaaggccgccggcaaggccgccgacggcgtggtc
ttcccggtccgcaccggcgtggtgtggggcggagaggcgccgggcatgcagacggtccgg
gaaatctccaaggtctccgacgcgtcgggcaacgcctatcggcccgtccactatatcagc
ggcatctgctccgccttctacatgaaggaggcgatggagtgggccgccaagaacggcggc
atcaccggcgccaacatcaagcagggcatgtaccagaagaaggactgggtgccggccggc
atggaaggggtctgcgtcccctcgacctggacgccggacgaccatcgcggcaccaccacc
gtggcgatctaccgcgccaaggtcggcggcgccaccgaggcctcggtggacgagctggtg
aaggcgggaacgatcaagctggagaaggtcaccagcgtcgacctgccgcgcaagaaggaa
tggctgggctggtaa
DBGET
integrated database retrieval system
