KEGG   Skermanella mucosa: JL100_003255
Entry
JL100_003255      CDS       T07652                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
smuc  Skermanella mucosa
Pathway
smuc00521  Streptomycin biosynthesis
smuc00523  Polyketide sugar unit biosynthesis
smuc00525  Acarbose and validamycin biosynthesis
smuc00541  Biosynthesis of various nucleotide sugars
smuc01055  Biosynthesis of vancomycin group antibiotics
smuc01100  Metabolic pathways
smuc01110  Biosynthesis of secondary metabolites
smuc01250  Biosynthesis of nucleotide sugars
Module
smuc_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:smuc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JL100_003255 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JL100_003255 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JL100_003255 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JL100_003255 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JL100_003255 (rfbB)
Enzymes [BR:smuc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JL100_003255 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 3Beta_HSD adh_short Sacchrp_dh_NADP KR Ldh_1_N
Other DBs
NCBI-ProteinID: UEM21799
LinkDB
Position
SKMUc:712129..713214
AA seq 361 aa
MKIIITGAAGFIGSAVARHLLRDTNASIVCLDKMTYAAHPDTLAPIIDGVRAVFEPVDIC
DRAEVERVFREHRPDAVMHLAAESHVDRSIEIPGVFIETNVVGTYVLLEAARRHWSELTG
ERRDGFRFHHVSTDEVYGSLGPTGKFTEETPYAPSSPYSASKASADHIVNAWHHTHGLPV
VVSNCSNNYGPYQFPEKLIPLMIINALEGKPLPVYGAGANVRDWLFVEDHAAALVRILTA
GRVGQKYNVGGDAERSNLEVVHAICDTLDGMLPRERPRRDLITHVADRPGHDLRYAIDAT
KIRRELGWEPSVTFEAGLRRTIEWYLTNQTWWQPLRSAVYGGQRLGLGALETTRRLEVVA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagatcatcatcaccggcgccgcaggcttcatcggttcggccgtggcgcggcacctc
ctgcgggacacgaacgcctccatcgtgtgcctggacaagatgacctacgcggcccatccc
gataccctggcgccgatcatcgacggggtgcgggcggtgttcgagccggtcgacatctgc
gaccgggccgaggtcgaacgggtcttccgggagcaccggcccgacgcggtcatgcacctg
gccgcggagagccatgtggaccggtcgatcgagatccccggcgtcttcatcgagaccaac
gtggtcggcacctacgtgctgctggaggcggcgcgccgccactggtcggagctgaccggg
gagcggcgggacggcttccggttccaccatgtctcgaccgacgaggtctacggctcgctc
gggccgaccggcaagttcaccgaggagacgccctacgcgcccagctcgccctactcggcg
agcaaggcctcggccgaccacatcgtcaacgcctggcaccatacccacgggctgccggtc
gtcgtcagcaactgctcgaacaactacggcccctaccagtttcccgagaagctgatcccg
ctgatgatcatcaacgcgctggaaggcaagccgctgccggtctacggcgccggggccaat
gtccgcgactggctgttcgtcgaggaccacgcggccgcgctggtgcggatcctcaccgcg
ggacgggtggggcagaaatacaatgtcggcggcgatgccgaacggagcaacctcgaggtc
gtgcacgccatctgcgacacgctcgacgggatgctgccgcgcgagaggccccgccgcgac
ctgatcacccatgtggccgaccggccgggccatgatctccgctacgcgatcgacgcgacg
aagatccgccgcgaactgggctgggaaccgtcggtgaccttcgaggccggcctgcgccgg
accatcgaatggtacctgaccaaccagacctggtggcagccgctccgctccgccgtctat
ggcgggcagcgcctcggtctcggcgccctcgaaaccacccgcaggctggaggttgtcgcc
tcgtga

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