Skermanella mucosa: JL100_003525
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Entry
JL100_003525 CDS
T07652
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00061
Fatty acid biosynthesis
smuc00071
Fatty acid degradation
smuc01100
Metabolic pathways
smuc01212
Fatty acid metabolism
smuc02024
Quorum sensing
smuc04146
Peroxisome
Module
smuc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JL100_003525
00071 Fatty acid degradation
JL100_003525
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JL100_003525
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL100_003525
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smuc01004
]
JL100_003525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smuc04147
]
JL100_003525
Enzymes [BR:
smuc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JL100_003525
Lipid biosynthesis proteins [BR:
smuc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JL100_003525
Exosome [BR:
smuc04147
]
Exosomal proteins
Exosomal proteins of breast milk
JL100_003525
Exosomal proteins of breast cancer cells
JL100_003525
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4314
Motif
Other DBs
NCBI-ProteinID:
UEM21850
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All DBs
Position
SKMUc:774170..775885
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AA seq
571 aa
AA seq
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MADPAAKLAEHPWARSYPADIDWNAEIPTAPLHRLMDDAVARFGDRPCIDFMDKRYTYAQ
VGALVDKAAKGFQDMGVGKGSKVGLFLPNTPYFVICYYAVLKAGGTVVNFNPLYAEREIA
KQIEDSDTDIMVTLDLAVLYGKIAKMLGQTRLKRVVVARMADILPFPKNWLFPIVKRKDV
ARIPSDDRHLAFARLIANAGRPAPVEIDPAEDVAVLQYTGGTTGVPKGAMLTHANIYANA
IQSRLWCTDAKPGQERMLGVLPLFHVFAMTGVMNLPLVLGAEMVLVPRFELDTVIRLIQS
KKPTLFPAVPTIYTAIVNHKDIGSYDLSSIRFCLSGGAPLPVEVKHAFETKTGCKLVEGY
GLSESSPVATANPMYGVNKAGSIGIPLPGTVIEIVSLDDRSRLVPLGEKGEVCIRGPQVM
KGYWKRPAETADALADGRLHTGDVGYLDEDGYTFIVDRIKDMILCGGYNVYPRNVEEAIY
LHPAVAECVVAGVPDPYRGQTVKAYVKLTEGHGLTREDLTEFLRDKLSPIEIPKHLEIRD
ELPKTMIGKLSRKALLEEEEARRSSRQVPEG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccggcagcgaagctcgcagagcacccgtgggcgcgttcgtaccccgcggac
atcgactggaacgccgagatcccgacggcgccgctccaccgcctcatggacgatgcggtc
gcccgattcggcgaccggccgtgcatcgacttcatggacaagcgctacacctacgcacag
gtcggcgccctggtcgacaaggcggcgaagggcttccaggacatgggcgtggggaagggc
agcaaggtcgggctgttcctgcccaacacgccttacttcgtgatctgctactacgcggtg
ctgaaggccggcggcacggtggtcaacttcaacccgctctacgccgagcgggagatcgcc
aagcagatcgaggacagcgacaccgacatcatggtcacgctcgacctggcggtgctctac
ggcaagatcgccaagatgctcgggcagacccggctgaagcgggtcgtcgtcgcccgcatg
gccgacatcctgcccttcccgaagaactggctgtttccgatcgtcaagcgcaaggacgtc
gcgcgcatcccgtccgacgaccggcacctcgccttcgccaggctgatcgccaatgccggc
cggcccgccccggtggagatcgacccggcggaggacgtggccgtgctccagtacaccggc
gggaccaccggcgtgcccaagggcgccatgctgacccacgccaacatctacgccaacgcc
atccagtcgcgcctgtggtgcaccgacgccaagccggggcaggagcgcatgctgggcgtg
ctgccgctgttccacgtcttcgccatgaccggcgtgatgaacctgccgctggtgctcggc
gccgagatggtgctggttccccggttcgagctggacaccgtgatccggctgatccagtcc
aagaagccgacgctgttccccgcggtgccgaccatctacaccgcgatcgtcaaccacaag
gacatcggctcctacgacctgtcgtcgatccgcttctgcctgtcgggcggggcgcccctg
ccggtggaggtcaagcacgcgttcgagaccaagaccggctgcaagctggtcgagggctac
ggcctgtcggaaagctccccggtcgccacggccaacccgatgtacggggtcaacaaggcc
ggctcgatcggcatcccgctgcccggcaccgtgatcgagatcgtcagcctggacgaccgc
tcccgcctggttcccctgggcgagaagggcgaggtctgcatccgcggcccgcaggtgatg
aagggatactggaagcgcccggccgagaccgcggacgcgctggccgacggccgcctgcat
accggcgacgtcgggtacctggacgaggacggctacaccttcatcgtcgaccggatcaag
gacatgatcctgtgcggcggctacaacgtctatccgcgcaacgtggaggaggcgatctac
ctgcatcccgccgtcgcggaatgcgtggtcgccggcgtgccggacccctaccggggccag
accgtcaaggcctatgtcaagctgaccgagggccacgggctgacgcgcgaggacctgacg
gagttcctgcgcgacaaactgtcgcccatcgagatccccaagcacctggagatccgcgac
gagctgccgaagaccatgatcggcaagctgtcccgcaaggcgctgctggaggaggaggaa
gcccgccgttccagccgtcaggtcccggagggctga
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