Skermanella mucosa: JL100_004135
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Entry
JL100_004135 CDS
T07652
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smuc01002
]
JL100_004135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
JL100_004135
Peptidases and inhibitors [BR:
smuc01002
]
Cysteine peptidases
Family C82
JL100_004135
Peptidoglycan biosynthesis and degradation proteins [BR:
smuc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JL100_004135
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UEM21963
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Position
SKMUc:899148..900827
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AA seq
559 aa
AA seq
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MRALFRGVLVLCALGGLPGAASAQAVEPLLPTLAEATEADVAIARRLSKDGPLEVDGQRL
RNLAALRRFYAERGFDPAWTDGAGLAPAAPGLVALVRQAEREGLEPQHYHPDAIERRQGM
AGVATLAELDLLITDAVMEYAVDLRAGRLTPRQIAPDLAAVPPRLDPQEIARTALAAPDL
AAFLIGFTPPHPQYAALRDVLKRYRAVAAAGGWPAAGDGPVLKPGMQDAGVPALRRRLAA
TGDYAGKDLSSTLYDGPLQAAVKRFQSYNGLDQDGVVGVSTRAALNVPAARRVGQIIANM
ERWRWLEDDLGERHVMVNIPGYTLKAVAPGADPLRMPVIVGTVERPTPVFSHRITHLVFN
PTWTIPPTVARNDILPKLIRNPGYLKEHDITLYESWAAGARRIDARGIDWRGVGPRITRY
RMRQDPGPKNSLGQVKFMFPNDFDVYLHDTPARDKFSRNARGLSSGCVRVGNPDALAGFL
MEGMEDWTAERRRQVLDAGETKTVWLRQSIPVHLTYQTVFVDDAGRTQFRDDIYDHDGAF
MNALTKRLPVQQTVAQAVN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagagcccttttccgtggagtcctggtcctttgcgctctcggcggattgccgggcgcg
gcgtcggcgcaggcggtcgagccgttgcttccgacgctggccgaggcgaccgaagccgat
gtcgcgatcgcgcgccggctcagcaaggacggaccgctcgaagtggacggccaacgtctg
cgcaatcttgcggcactccgccgtttctatgccgagaggggcttcgatccggcctggacc
gacggcgccggccttgctcccgcggcacccgggctggtggcactggtcaggcaggcggag
cgggaagggctggagccgcagcactaccatcccgacgcgatcgagcggcggcagggcatg
gccggcgtggcgacgctggccgaactggacctgctgatcaccgacgcggtcatggagtat
gcggtcgacctgcgcgccgggcgcctgacgccccgccagatcgccccggacctggccgcc
gtgccgccccgcctcgacccgcaggagatcgcgcggaccgccctggcggcgcccgacctc
gccgccttcctgatcggcttcacgccgccccatccgcaatacgcggccctgcgcgacgtg
ctgaagcgctaccgggcggtcgcggcggcgggcggctggcccgcggcgggcgacgggccg
gtgctgaagccgggcatgcaggatgccggcgtgccggccttgcggcggcgcctcgccgcg
accggcgactatgccggcaaggacctctcctccacgctgtacgacgggccgctccaggcg
gcggtgaagcggttccagtcctacaacggcctcgaccaggacggcgtggtcggggtctcg
acgcgggcggccctcaacgtccccgccgcccggagggtcggccagatcatcgccaacatg
gagcgctggcgttggctggaggacgacctgggcgagcggcacgtcatggtgaacataccc
ggctacacgctcaaggcggtggcgccgggcgccgatccgctgcgcatgcccgtgatcgtc
ggcaccgtggaacggccgacgccggttttcagccaccgcatcacccatctggtgttcaat
ccgacctggacgatcccgccgaccgtcgcccgcaacgacatcctgccgaagctgatccgc
aatcccggctacctgaaggaacacgacattaccttgtacgagagctgggccgccggcgcg
cggaggatcgacgcgcgggggatcgactggcgcggcgtcggacccaggatcacgcgctac
cggatgcgccaggacccggggccgaagaactccctgggccaggtcaagttcatgttcccc
aacgatttcgacgtctatctgcatgacaccccggcgcgcgacaagttcagccgcaacgcc
cgcgggttgtcgtcgggctgcgtccgcgtcggcaaccccgacgccctggccgggttcctg
atggaggggatggaggactggacggcggagcgccgccggcaggtgctcgacgccggggaa
acaaagaccgtctggctgcggcaatccatcccggtccacctgacgtaccagaccgtcttc
gtcgacgacgccggccggacccagttccgcgacgacatctacgaccacgacggcgccttc
atgaacgccctgacgaagcggctgccggtgcagcagacggtggcgcaggcggtgaactga
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