Skermanella mucosa: JL100_004710
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Entry
JL100_004710 CDS
T07652
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smuc
Skermanella mucosa
Pathway
smuc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL100_004710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_004710
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JL100_004710
DNA repair and recombination proteins [BR:
smuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JL100_004710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UEM22069
LinkDB
All DBs
Position
SKMUc:complement(1027268..1027948)
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AA seq
226 aa
AA seq
DB search
MTDRTTIPHQVSPRASLPKALRDPGELARRGTLTDSAHVRPLTRYARDLATRMGSPVPLA
DPLDGGVSARLLILLETPGPKMLTTGFVSRDNPTGTAANLFRFLEQAGIARAETVIWNIV
PWLIQVPGTPNRNPTRAQVAQGLLHLPDFLDLLPGLELAVTAGRKAEAARGLLEARNIPC
LAMPHPSPTYVCTSPDVARRISACLTAAAERLAAQRLDARRLDVTR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccgtaccaccatcccacatcaggtctcgccccgggcttcactccccaaggcg
ctccgcgatccgggcgagctggcccggcgcgggacgctgacggacagcgcgcacgtgcgg
ccgctgacgcggtacgccagggatctggctacccgcatgggcagcccggttccgctggcc
gacccgctcgacggcggcgtgtcggcaaggctgctgatcctgctggaaacgccgggaccc
aagatgctgaccaccgggttcgtgtcgcgggacaaccccacggggaccgccgcgaacctg
ttccgtttcctggaacaggccggcatcgcccgtgcggaaacggtgatctggaacatcgtc
ccgtggctgatccaggttccgggcacgcccaaccgcaacccgacccgggcccaggtcgcc
caagggctgctccacctgcccgacttcctggacctgctgccggggctggagctggccgtc
accgccgggcgcaaggccgaggccgcccggggcctgctggaggcccggaacatcccgtgc
cttgccatgccgcaccccagcccgacctatgtctgcaccagccccgacgtggcacgccgg
atctcggcctgcctgacggcggcggcggagcggctggccgcccaacgactggacgcccga
cgactggacgtcaccaggtaa
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