Skermanella mucosa: JL100_004790
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Entry
JL100_004790 CDS
T07652
Name
(GenBank) TonB-dependent receptor
Organism
smuc
Skermanella mucosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
TPR_2
TonB_dep_Rec_b-barrel
TPR_19
TPR_11
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_9
CNP1
Motif
Other DBs
NCBI-ProteinID:
UEM22085
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All DBs
Position
SKMUc:complement(1041334..1044744)
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AA seq
1136 aa
AA seq
DB search
MITTKLPKSSVLALLAAGMTAGAAPAAAQSLEAACAAPVGRIASVEGGVERRTAEGSWRS
ARIEEPLCAGDTVRTGKYSRAAIALANDSVLRLDQETTLQVGAVPADEPSVLDLVKGIMQ
VFSHRPRSLSIDTPFVNASVEGTEFLVLAETDRASVTVFDGKVRASNAQGAVTLAAAGTA
EARAGAAPVQGVAVHPRDAARWTLYYQPILSEVAAAPAAGSGDLPAPVADALALRRQGDF
AGAIARLDRAAAEGAGAPGPVADRIALFRQSLLLEVGRVEEARAGVEAMLSRAPGNADAL
ALRSVILVAQNETEPALADGRRAVELDPRSAPARIALSYAQQAALDLEGARATMEEAVAA
QPGDALARARLAEILLTLGYRGEAERSARAAAELAPNLGRAQTVLGFAALVRQRPQEAQA
VFERAIRLEPADPQPRLGMGLALIRQGRLEAGRNEIEIAAGLDTENALVRSYLGRGYDEE
RRDDRAAGQYEIAKQLDPNDPTPFLFEGLRLRAANQPVEALAEIQRSIELNDNRAPFRSR
LLLNQDLATRGAGLGRIYRDLGFERLGLPVGSASLAADPGSASVERFLSDLYGQQERHEI
ARSSALLRSQLLQPITIDPVQPSLSTTDLEILPGALPSEAGFNEYGALFERDQIRLNAAG
IVGNLDTRADEVTLSGIVGRAAFSAGQFHYQSDGYRENNDVEYDIYTLFGQAALTDTLSL
QAELRSRRSEQGDLVQNFDPDDFSRDSRTDIDQDTARVGLRYSPTPRVDLLASVIVSDRE
SHQVQAEEDFTFTDDIKQTGTDTQVQGIYRGNLFNVTAGGGFASIRQRNVATLDIPALGQ
SFPTTARFTNRQTNAYGYVNLTPVRDVTVTLGLSGDKFENGALDFSEVNPKAGIQWQVND
GLRVRAAAFRTFKRLLIVDQTLEPTQIAGFNQFTDEFNQTSAWVKGIGLDATLARGSFGS
LFGGVEYTRRDLDVPLVVQRDPPEYRTDEREEDEARAYLYWAASRDWAVSAEAQWQDIEN
TNRQIDVAELRTLTVPVQVRYFADNGLFARVGANFVSQQVEERLPQSFDQTRENFVTVDA
SLGFRLPNRRGSISLEVRNILDEEFLYQDLDSVTNSLTRPRFIPARTVLGRLSLTF
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaccaagcttcccaaatcctcggtactcgcgttgctcgccgccggcatgacg
gccggcgcagcgccagccgcggcgcaatcccttgaagcggcctgcgcggcgccggtcggg
cgcatcgcatcggtcgagggcggcgtcgagcggaggaccgcggagggctcatggcgttcc
gcccggatcgaagagccgctgtgcgccggcgacacggtgcggacgggcaagtacagccgg
gccgccatcgcgctggccaacgattcggtgctccgcctggaccaggagacgacgctccag
gtcggggcggtaccggcggacgagccgtccgtgctggatctggtcaagggcatcatgcag
gtcttcagccaccgcccccgcagcctcagcatcgacacgcccttcgtgaacgcgtcggtg
gagggcacggagttcctggtgctggccgaaacggaccgggcgtcggtcacggtattcgac
ggcaaggtgcgggcgagcaacgcccagggcgccgtaaccctcgccgcggcggggacggcc
gaggcgcgcgccggcgcggcgccggtccagggcgtggcggtccacccgcgcgacgcggca
cgctggacgctgtattatcagccgatcctcagtgaagtcgcagccgctccggcggccggc
tccggggacctgccggcccccgtcgccgatgcgctggcgctccgccgccagggtgatttc
gcaggcgccatcgcccggctcgaccgcgccgccgcggagggagcgggcgcgccggggccg
gtcgccgaccgcatcgccctgttccgccagtcgctgctgctcgaagtcggccgggtcgag
gaagcccgcgccggggtcgaggccatgctgtcgcgggctcccggaaacgccgacgcgctg
gcgctgcgtagcgtcatcctggtcgcccagaacgagaccgaaccggcgctggccgacggc
cgccgcgcggtcgagctggatccccgctccgccccggcccgcatcgccctgtcctatgcg
cagcaggccgccctcgacctggagggcgcgcgcgccaccatggaggaagcggtcgcggcc
cagccgggcgatgccctggcccgcgcgcggctggccgagatcctgctgacactgggctac
aggggcgaggcggaacggtccgcgcgggcggcggcagagctggcgccgaacctgggccgg
gcgcagaccgtgctgggcttcgcggcgctggtgcgccagcggccgcaggaagcgcaggcg
gtgttcgagcgcgcgatccggctggagcccgccgacccgcagccccgcctgggaatgggc
ctggccctgatccggcaaggccgcctggaagcgggacgcaacgagatcgagatcgccgcc
ggcctggataccgagaacgccctggtccgaagctatctcggccgcggctacgacgaggaa
cggcgcgacgaccgcgcggcgggacagtacgagatcgccaagcagctcgacccgaacgat
ccgacgcccttcctcttcgagggtctgcggctgcgggcggccaaccagccggtcgaggcg
ctggcggaaatccagcgctccatcgagctgaacgacaaccgcgcgcctttccgttctcgc
ctgctgctgaaccaggacctggcgacccgcggcgccgggctgggccggatctaccgggac
ctgggattcgagcggctcggtctgcccgtcgggtcggcgtcgcttgccgccgatcccggc
agcgcgtcggtcgagcgcttcctgtccgacctttacggccagcaggagcgccacgagatc
gcccggtccagcgccttgctccggtcgcagctcctccagccgatcaccatcgacccggtg
cagcccagcctgagcacgacggacctggaaatcctgcccggcgcgcttccgtccgaagcc
ggcttcaacgaatacggcgcgctgttcgagcgcgaccagatccgcctgaacgccgccggc
atcgtcgggaacctggacacccgcgcggacgaagtgacgctttcgggcatcgtcggtcgg
gcggccttcagcgccggccagttccactaccagagcgacggctatcgcgagaacaacgac
gtcgagtacgacatctacacgctgttcgggcaggcggcgctgaccgataccctgagtctc
caggcggaattgcggtcccgccgcagcgaacagggcgacctggtgcagaatttcgacccc
gacgacttctcgcgcgacagccgcaccgacatcgaccaggacaccgcccgggtcggcctg
cgctactcgcccacgccgcgcgtggacctgctggcctcggtgatcgtcagcgaccgggag
tcgcaccaggtccaggccgaggaagatttcaccttcacggacgacatcaagcagaccggg
accgacacgcaagtccagggcatctaccggggcaacctgttcaacgtgacggcgggcggc
ggtttcgccagcatccgccagcggaacgtcgcgaccctcgatatcccggcgctgggccag
agcttcccgaccaccgcgcggttcacgaaccggcagaccaacgcctacgggtacgtcaac
ctgacccccgtgcgcgacgtgaccgtgacgctcggcctcagcggcgacaagttcgagaac
ggcgcgctcgacttcagcgaggtcaatccgaaagccggcatccagtggcaggtcaacgac
gggctgcgggtgcgcgccgctgcgttccggaccttcaagcggctcctgatcgtcgaccag
acccttgaaccgacgcagatcgccggcttcaaccagttcaccgacgagttcaaccagacc
agcgcctgggtcaagggcatcggtcttgatgccacgctggcccgcggcagcttcggttcc
ctcttcggcggggtcgagtatacccgccgggatctggacgtgccgctggtcgtgcagcgc
gacccgccggagtaccggaccgacgagcgcgaggaggacgaagcgcgggcctatctctac
tgggccgcctcccgggactgggcggtctcggcggaagcccagtggcaggacatcgaaaat
accaaccggcagatcgacgtcgcggagctgcgcaccctgacggtgccggtccaggtccgc
tatttcgccgacaacggactgttcgcccgcgtcggggcgaacttcgtgagccagcaggtc
gaggagcgcctgccgcagtccttcgaccagacgcgcgagaacttcgtcacggtcgatgca
tcgctcggcttccggcttcccaaccgccgcggatcgatcagccttgaagtccggaatatt
ttagacgaagaattcctgtaccaggatctcgactcggtcaccaactcgctgacacgccca
cgcttcatcccggcgcgcacggtgctgggccggctttcccttaccttctga
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