Skermanella mucosa: JL100_005075
Help
Entry
JL100_005075 CDS
T07652
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00250
Alanine, aspartate and glutamate metabolism
smuc00310
Lysine degradation
smuc00350
Tyrosine metabolism
smuc00650
Butanoate metabolism
smuc00760
Nicotinate and nicotinamide metabolism
smuc01100
Metabolic pathways
smuc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JL100_005075 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JL100_005075 (gabD)
00310 Lysine degradation
JL100_005075 (gabD)
00350 Tyrosine metabolism
JL100_005075 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JL100_005075 (gabD)
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JL100_005075 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JL100_005075 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JL100_005075 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UEM23979
LinkDB
All DBs
Position
SKMUc:1095103..1096584
Genome browser
AA seq
493 aa
AA seq
DB search
MTETAATLGLKDPGLLRGQCYIDGQWIDADSGKTIDVTNPADGRKLGTVPAMGTAETRRA
IEAAGRAYPAWRAKTAKERSKILRAWFDLMMANQEDLARIMTAEQGKPIAESRGEVAYAA
SFIEWFAEEAKRVYGDTIPPHLAGRRLVVTKEPVGVCAAITPWNFPAAMITRKAGPALAV
GAPIVIKPATATPFSAFAMAVLAERAGVPAGILSVLTGSAKEIGGEMTTNPIVRKLTFTG
STEIGKQLMSQCAGTVKKVSLELGGNAPFIVFDDADLDEAVKGAIASKYRNTGQTCVCAN
RLLVQNGIYDAFAAKLAEAVKALKVADGMTEGAQQGPLIDMAAIEKVEDHIRDALSKGAR
IVVGGERHPLGGTFFQPTVLADVTTEMKVTREETFGPVAPLFRFDTEEEAVKMANDTEYG
LAAYFYSRDVGRIWRVADGLEYGIVGINEGIISTEVAPFGGMKESGIGREGSKYGMEEYL
EVKYLCMGGIDNA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccgcggcaacgctcggcctcaaggatcccggactgctgcgcggccagtgc
tatatcgacggtcagtggatcgatgccgacagcggcaagaccatcgacgtcaccaatccc
gcggatggcaggaagctcggcaccgttcccgccatgggcacggccgagacgcggcgcgcg
atcgaggcggccggccgggcttatcccgcgtggcgcgccaagaccgccaaggaacgctcg
aagatcttgcgcgcctggttcgacctgatgatggcgaaccaggaggacctggcccggatc
atgactgcggagcagggcaagccgatcgccgagtcgcgaggcgaggtcgcctatgccgcc
tccttcatcgagtggttcgccgaggaggcgaagcgggtctacggcgacacaatcccgccg
cacctggccggccgccggctcgtggtgaccaaggagccggtcggcgtctgcgccgccatc
acgccgtggaacttcccggccgccatgatcacccgcaaggccggccccgcgctggcggtc
ggcgccccgatcgtgatcaagccggccacggccacgcctttttcagccttcgccatggcc
gttctggccgagcgtgcgggggtgccggccggcatcctgagcgtgctgaccggttccgcc
aaggagatcggcggcgagatgacgaccaacccgatcgtgcggaagctgaccttcaccggc
tcgaccgagatcggcaagcagctgatgtcccagtgcgccggcacggtcaagaaggtgtcg
ctggagctgggcggcaacgcgcctttcatcgtgttcgacgacgccgacctggacgaggcg
gtcaagggcgccatcgcgtccaagtaccgcaacaccgggcagacctgcgtctgcgccaac
cgcctgctggtgcagaacggcatctacgacgccttcgccgccaagctggccgaggcggtc
aaggcgttgaaggtagccgatgggatgaccgagggcgcccagcagggcccgctgatcgac
atggcggcgatcgagaaggtcgaggaccatatccgtgacgcgctgtccaagggcgcccgg
atcgtcgtcggcggcgagcgccaccccctcggcggcaccttcttccagccgaccgtcctg
gccgacgtcaccaccgagatgaaggtgacccgcgaggagaccttcgggccggtggcgccg
ctgttccgcttcgacacggaggaggaggcggtgaagatggcgaacgacaccgagtacggg
ctggcggcctacttctacagccgcgacgtcggccggatctggcgggtcgccgacgggctg
gaatacggcatcgtcggcatcaacgagggcatcatctcgaccgaggtggcgccgttcggc
ggcatgaaggagagcggtatcggccgcgagggctccaagtacggcatggaggaatacctg
gaggtcaaatatctctgcatgggcggcatcgataacgcctga
DBGET
integrated database retrieval system
