Skermanella mucosa: JL100_005160
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Entry
JL100_005160 CDS
T07652
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smuc
Skermanella mucosa
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smuc03016
]
JL100_005160
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JL100_005160
Transfer RNA biogenesis [BR:
smuc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JL100_005160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UEM22142
LinkDB
All DBs
Position
SKMUc:1120254..1120865
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AA seq
203 aa
AA seq
DB search
MPIELYDGDLPDDYDFGPSVAIDTETMGLNPVRDRLCLVQLSAGDGNCHMVQFRQGQYDA
PNLKRLLTDPTVTKLFHFARFDIAVLQAYLGVVCEPVYCTKIASRLVRTFTDRHGLKDLC
KDLLGVELSKQQQSSDWGAADLTPEQLKYAASDVLHLHELRGRLDAMLEREGRTGLAAEC
FRFLPTRAALDLGGWADQDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatagagctttacgacggcgatctccccgacgattacgatttcggccccagcgtc
gccatcgataccgaaaccatggggttgaaccccgtccgcgaccgcctgtgcctggtccag
ctctcggccggcgacggcaactgccatatggtgcagttccgccagggtcaatatgacgcg
cccaacctgaagcggctgctgaccgatccgaccgtcaccaagctgtttcacttcgcccgg
tttgacatcgccgtcctgcaagcctacctgggagtcgtgtgcgagccggtctattgcacc
aagatcgcttccaggctggtgcgcaccttcaccgatcgccacggattgaaggacctatgc
aaggacctgctgggcgtggagctgtcgaagcagcagcaatcctcggactggggtgccgcc
gacctgacgcccgaacagttgaaatatgccgcctccgacgtgcttcacctgcacgaactt
cgcggcaggctggatgccatgctggagcgcgaggggcgcaccggcctggcggccgagtgc
ttccggttcctgccgacccgcgcggcgctggatctcgggggctgggcggaccaggatatc
ttcgcccattga
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