Skermanella mucosa: JL100_005200
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Entry
JL100_005200 CDS
T07652
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00520
Amino sugar and nucleotide sugar metabolism
smuc01100
Metabolic pathways
smuc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JL100_005200
Enzymes [BR:
smuc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
JL100_005200
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
UEM22148
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Position
SKMUc:complement(1127715..1128671)
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AA seq
318 aa
AA seq
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MYGRKRVLVTGGAGFLGSFLCERLLGEGCEVICVDNYFTGSRENIVHLLDNPYFEVIRHD
ITFPLYVEVDEIYNLACPASPIHYQFDPVQTVKTSVHGAINILGLAKRVKAKVFQASTSE
VYGDPSIHPQTEAYWGNVNPIGPRACYDEGKRCAETLFFDYHRQYQLNIRVARIFNTYGP
RMHPQDGRVVSNFIVQALRGEPVTLYGDGSQTRSFCYVEDLIEGFVRLMAAPDDVIGPIN
LGNPGEFTIRQLAELVIEMTGSKSEIVFKPLPQDDPTQRRPDISRAKEKLDWQPTVPLKE
GLARTIAYFERKLPEWQS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtacggacgaaagcgggtgctggtcacgggcggcgcgggcttcctcgggtcgttcctg
tgcgagcgattgctgggcgaaggatgtgaagtcatatgcgttgataactatttcacagga
tcgcgcgagaacatcgtccacctgctggacaatccctattttgaagtgatccgccacgac
atcacattcccgctttatgtggaagtggacgagatctataacttggcctgcccggcctcc
ccgatccattaccagttcgacccggtccagaccgtcaagaccagcgtccacggcgcgatc
aacatactgggactggccaagagggtgaaggccaaggtgttccaggcctcgaccagcgaa
gtctacggcgacccctcgatccatccgcagacggaagcctactggggcaacgtcaacccc
atcggcccgcgcgcctgctatgacgaggggaagcgctgcgccgagacgctgttcttcgac
tatcaccgccagtatcagttgaatatccgggtcgcccgcatcttcaacacctacggaccg
cgcatgcatccgcaggacggccgcgtggtgtcaaatttcatcgtgcaggccctgcggggc
gagccggtgacgctgtacggcgacggcagccagacccggtccttctgctacgtggaagac
ctgatcgagggtttcgtccgcctgatggcggcacccgacgacgtgatcgggccgatcaac
ctgggcaatccgggggaattcaccatccggcaactcgcggaactggtgatcgagatgacc
gggtcgaaatccgagatcgtcttcaagcccctgccccaggacgacccgacgcagcgccgg
ccggacatttcccgcgcgaaggagaagctggactggcagccgacggtcccgctgaaggaa
ggcttggcgcggacgatcgcctatttcgaacgaaaattgccggaatggcagagctga
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